Detailed information NTG1131405

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: H1W89_RS04275
• Genome accession: NZ_LR822029
• Coordinates: 812979..813860 (+)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_1035
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 807979..818860

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1W89_RS04250 (STHERMO_0909)	-	809479..809934 (+)	456	WP_024704150.1	DUF4832 domain-containing protein	-
H1W89_RS04255 (STHERMO_0910)	galE	809949..810962 (+)	1014	WP_064355887.1	UDP-glucose 4-epimerase GalE	-
H1W89_RS04260 (STHERMO_0912)	-	811150..811386 (+)	237	WP_002946959.1	DUF1146 family protein	-
H1W89_RS04265 (STHERMO_0913)	murA	811456..812727 (+)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
H1W89_RS04270 (STHERMO_0914)	-	812729..812917 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
H1W89_RS04275 (STHERMO_0915)	endA	812979..813860 (+)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
H1W89_RS04280 (STHERMO_0916)	-	813931..814581 (-)	651	WP_100273221.1	amino acid ABC transporter permease	-
H1W89_RS04285 (STHERMO_0917)	-	814593..815291 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
H1W89_RS04290 (STHERMO_0918)	-	815309..816142 (-)	834	WP_179970665.1	transporter substrate-binding domain-containing protein	-
H1W89_RS04295 (STHERMO_0919)	-	816154..816921 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
H1W89_RS04300 (STHERMO_0920)	vicR	817448..818155 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=1131405 H1W89_RS04275 WP_011681210.1 812979..813860(+) (endA) [Streptococcus thermophilus isolate STH_CIRM_1035]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=1131405 H1W89_RS04275 WP_011681210.1 812979..813860(+) (endA) [Streptococcus thermophilus isolate STH_CIRM_1035]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594