Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   H1W89_RS02125 Genome accession   NZ_LR822029
Coordinates   389933..390664 (+) Length   243 a.a.
NCBI ID   WP_002951673.1    Uniprot ID   A0AAP2RM94
Organism   Streptococcus thermophilus isolate STH_CIRM_1035     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 384933..395664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1W89_RS02100 (STHERMO_0427) - 385056..387155 (+) 2100 WP_180474503.1 ATP-dependent Clp protease ATP-binding subunit -
  H1W89_RS10115 - 387573..387698 (+) 126 WP_011681534.1 hypothetical protein -
  H1W89_RS02105 (STHERMO_0429) - 387717..388352 (+) 636 WP_014727665.1 DUF4230 domain-containing protein -
  H1W89_RS02110 (STHERMO_0430) - 388371..389102 (+) 732 WP_014608636.1 hypothetical protein -
  H1W89_RS02115 (STHERMO_0431) - 389144..389452 (-) 309 WP_014608635.1 hypothetical protein -
  H1W89_RS02120 (STHERMO_0432) - 389449..389868 (-) 420 WP_011681530.1 HIT family protein -
  H1W89_RS02125 (STHERMO_0433) pptA 389933..390664 (+) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  H1W89_RS02130 (STHERMO_0434) pptB 390664..391698 (+) 1035 WP_024703983.1 ABC transporter permease Regulator
  H1W89_RS02135 (STHERMO_0435) ccrZ 391756..392547 (+) 792 WP_180474504.1 cell cycle regulator CcrZ -
  H1W89_RS02140 (STHERMO_0436) trmB 392557..393198 (+) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  H1W89_RS02150 (STHERMO_0437) - 393434..394615 (-) 1182 WP_002951656.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26830.05 Da        Isoelectric Point: 4.4606

>NTDB_id=1131393 H1W89_RS02125 WP_002951673.1 389933..390664(+) (pptA) [Streptococcus thermophilus isolate STH_CIRM_1035]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQILAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1131393 H1W89_RS02125 WP_002951673.1 389933..390664(+) (pptA) [Streptococcus thermophilus isolate STH_CIRM_1035]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGAAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCAACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAATCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGATCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

100

100

1
  pptA Streptococcus salivarius strain HSISS4

97.119

100

0.971

Multiple sequence alignment