Detailed information NTG1131356

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: H1X63_RS06970
• Genome accession: NZ_LR822027
• Coordinates: 1344995..1345921 (-)
• Length: 308 a.a.
• NCBI ID: WP_179972090.1
• Uniprot ID: A0A8D6U7Y1
• Organism: Streptococcus thermophilus isolate STH_CIRM_998
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1339995..1350921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1X63_RS06940 (STHERMO_1515)	-	1340075..1340869 (-)	795	WP_179972085.1	HAD-IIB family hydrolase	-
H1X63_RS06945 (STHERMO_1516)	-	1341051..1341428 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
H1X63_RS06950 (STHERMO_1517)	-	1341433..1342131 (+)	699	WP_179972086.1	ABC transporter ATP-binding protein	-
H1X63_RS06955 (STHERMO_1518)	-	1342143..1342928 (+)	786	WP_179972087.1	ABC transporter permease	-
H1X63_RS06960 (STHERMO_1519)	amiF	1342981..1343907 (-)	927	WP_179972088.1	ATP-binding cassette domain-containing protein	Regulator
H1X63_RS06965 (STHERMO_1520)	amiE	1343900..1344985 (-)	1086	WP_179972089.1	ABC transporter ATP-binding protein	Regulator
H1X63_RS06970 (STHERMO_1521)	amiD	1344995..1345921 (-)	927	WP_179972090.1	oligopeptide ABC transporter permease OppC	Regulator
H1X63_RS06975 (STHERMO_1522)	amiC	1345921..1347414 (-)	1494	WP_180487727.1	ABC transporter permease	Regulator
H1X63_RS06980 (STHERMO_1523)	amiA3	1347480..1349456 (-)	1977	WP_180487728.1	peptide ABC transporter substrate-binding protein	Regulator
H1X63_RS06985	-	1349692..1349882 (-)	191	Protein_1315	IS3 family transposase	-
H1X63_RS11100	-	1349876..1350286 (-)	411	Protein_1316	ATP-binding cassette domain-containing protein	-
H1X63_RS11105 (STHERMO_1526)	-	1350384..1350632 (-)	249	Protein_1317	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34670.87 Da
• Isoelectric Point: 9.7054

>NTDB_id=1131356 H1X63_RS06970 WP_179972090.1 1344995..1345921(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_998]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILITIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATLLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPPLLVIIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1131356 H1X63_RS06970 WP_179972090.1 1344995..1345921(-) (amiD) [Streptococcus thermophilus isolate STH_CIRM_998]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAGTCAACAGTTGTAATGTTGGGAATCTTGATTACTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAACGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCCTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCCCTCTCCTTGTAATTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTCTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterProScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	98.701	100	0.987
amiD	Streptococcus thermophilus LMD-9	98.701	100	0.987
amiD	Streptococcus salivarius strain HSISS4	95.455	100	0.955