Detailed information NTG1131320

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: H1X63_RS01120
• Genome accession: NZ_LR822027
• Coordinates: 198700..199737 (+)
• Length: 345 a.a.
• NCBI ID: WP_232086215.1
• Uniprot ID: A0A7U7C721
• Organism: Streptococcus thermophilus isolate STH_CIRM_998
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 193700..204737

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1X63_RS01105 (STHERMO_0192)	-	194949..196596 (+)	1648	Protein_166	peptide ABC transporter substrate-binding protein	-
H1X63_RS01110 (STHERMO_0193)	-	196727..197641 (+)	915	WP_179972557.1	ABC transporter permease	-
H1X63_RS01115 (STHERMO_0194)	-	197652..198683 (+)	1032	WP_258380588.1	ABC transporter permease	-
H1X63_RS01120 (STHERMO_0195)	oppD	198700..199737 (+)	1038	WP_232086215.1	ABC transporter ATP-binding protein	Regulator
H1X63_RS01125 (STHERMO_0196)	amiF	199739..200677 (+)	939	WP_100262323.1	ABC transporter ATP-binding protein	Regulator
H1X63_RS10395 (STHERMO_0197)	-	200791..200952 (+)	162	WP_232086214.1	hypothetical protein	-
H1X63_RS01135 (STHERMO_0198)	hslO	201227..202093 (+)	867	WP_100262322.1	Hsp33 family molecular chaperone HslO	-
H1X63_RS01140 (STHERMO_0199)	dusB	202086..203063 (+)	978	WP_179972558.1	tRNA dihydrouridine synthase DusB	-
H1X63_RS01145 (STHERMO_0200)	-	203266..204129 (+)	864	WP_011226821.1	Rgg/GadR/MutR family transcriptional regulator	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 38503.48 Da
• Isoelectric Point: 5.4595

>NTDB_id=1131320 H1X63_RS01120 WP_232086215.1 198700..199737(+) (oppD) [Streptococcus thermophilus isolate STH_CIRM_998]
MKETVLSVKNLHVNFHTYAGEVKAIRDVNFDLKKGETLAIVGESGSGKSVMTRTLMGLSEKNAKVTGDITFKGRDMQALR
EEDWVKVRGNDIAMIFQDPMTSLDPTMKIGLQIAEPIMIHTKVSKKEALDMALQLMKDVGIPNAEEHINDYPHQWSGGMR
QRAVIAIALAADPEILIADEPTTALDVTIQAQILRLMKKIQEERDSSIIFITHDLGVVAGMADRVAVMYAGKILEYGTVD
EVFYNPQHPYTWGLLNSMPTIETESGSLEAIPGTPPDLLYPPKGDAFAPRNVFALAIDYQEEPPMFKVSDTHFAATWLLD
ERAPKVTPPSPILKRWEKWSKMKEK

Nucleotide

• Length: 1038 bp

>NTDB_id=1131320 H1X63_RS01120 WP_232086215.1 198700..199737(+) (oppD) [Streptococcus thermophilus isolate STH_CIRM_998]
ATGAAAGAAACGGTTTTAAGTGTAAAAAATCTCCATGTTAATTTTCATACTTACGCTGGAGAAGTAAAAGCGATTCGTGA
TGTCAATTTTGACTTGAAAAAAGGTGAGACACTGGCAATTGTTGGTGAGTCTGGCTCAGGAAAATCTGTAATGACAAGGA
CATTAATGGGTCTATCAGAGAAAAACGCTAAGGTAACTGGAGACATTACCTTTAAAGGGCGCGATATGCAAGCCTTGAGG
GAGGAAGATTGGGTCAAGGTCCGTGGAAATGATATTGCTATGATTTTTCAAGATCCTATGACCAGTCTTGACCCTACTAT
GAAAATTGGGCTCCAAATTGCTGAGCCTATTATGATTCATACCAAAGTATCTAAGAAAGAAGCTTTAGATATGGCTTTAC
AATTAATGAAAGATGTTGGGATACCTAATGCCGAAGAACATATAAATGACTACCCTCACCAATGGTCAGGAGGAATGCGT
CAAAGAGCAGTAATTGCCATTGCTCTAGCTGCAGATCCTGAAATTTTGATTGCTGACGAGCCTACTACAGCTTTAGATGT
TACGATTCAAGCACAAATTCTTCGTCTGATGAAAAAAATCCAAGAAGAGCGTGATTCATCCATTATTTTTATTACTCATG
ACTTGGGTGTTGTCGCTGGGATGGCTGATCGTGTAGCGGTTATGTATGCTGGCAAAATTTTGGAATATGGGACTGTGGAT
GAGGTTTTCTATAATCCGCAACACCCATACACATGGGGACTTCTTAACTCTATGCCTACAATAGAAACAGAATCTGGCAG
CCTAGAAGCTATTCCAGGAACTCCTCCAGATTTGCTTTATCCTCCTAAAGGTGATGCCTTTGCTCCTCGAAATGTCTTTG
CTTTAGCTATTGATTATCAGGAAGAACCGCCAATGTTTAAAGTATCAGATACGCATTTTGCAGCAACATGGCTCTTAGAT
GAACGAGCTCCTAAAGTAACCCCTCCTTCGCCAATATTGAAACGATGGGAAAAATGGTCAAAGATGAAGGAGAAATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (26-182)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (234-295)

3D structure

• AlphaFold DB: A0A7U7C721

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	80.702	99.13	0.8
amiE	Streptococcus salivarius strain HSISS4	56.932	98.261	0.559
amiE	Streptococcus thermophilus LMG 18311	56.342	98.261	0.554
amiE	Streptococcus thermophilus LMD-9	56.342	98.261	0.554