Detailed information NTG1131235

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: H1X08_RS08915
• Genome accession: NZ_LR822025
• Coordinates: 1737639..1738676 (-)
• Length: 345 a.a.
• NCBI ID: WP_232086215.1
• Uniprot ID: A0A7U7C721
• Organism: Streptococcus thermophilus isolate STH_CIRM_961
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1732639..1743676

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1X08_RS08890 (STHERMO_2037)	-	1733247..1734110 (-)	864	WP_011226821.1	Rgg/GadR/MutR family transcriptional regulator	-
H1X08_RS08895 (STHERMO_2038)	dusB	1734313..1735290 (-)	978	WP_180482262.1	tRNA dihydrouridine synthase DusB	-
H1X08_RS08900 (STHERMO_2039)	hslO	1735283..1736149 (-)	867	WP_100262322.1	Hsp33 family molecular chaperone HslO	-
H1X08_RS10980 (STHERMO_2040)	-	1736424..1736585 (-)	162	WP_232086214.1	hypothetical protein	-
H1X08_RS08910 (STHERMO_2041)	amiF	1736699..1737637 (-)	939	WP_100262323.1	ABC transporter ATP-binding protein	Regulator
H1X08_RS08915 (STHERMO_2042)	oppD	1737639..1738676 (-)	1038	WP_232086215.1	ABC transporter ATP-binding protein	Regulator
H1X08_RS08920 (STHERMO_2043)	-	1738693..1739725 (-)	1033	Protein_1719	ABC transporter permease	-
H1X08_RS08925 (STHERMO_2045)	-	1739736..1740650 (-)	915	WP_179972557.1	ABC transporter permease	-
H1X08_RS08930 (STHERMO_2046)	-	1740781..1742427 (-)	1647	WP_180482263.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 38503.48 Da
• Isoelectric Point: 5.4595

>NTDB_id=1131235 H1X08_RS08915 WP_232086215.1 1737639..1738676(-) (oppD) [Streptococcus thermophilus isolate STH_CIRM_961]
MKETVLSVKNLHVNFHTYAGEVKAIRDVNFDLKKGETLAIVGESGSGKSVMTRTLMGLSEKNAKVTGDITFKGRDMQALR
EEDWVKVRGNDIAMIFQDPMTSLDPTMKIGLQIAEPIMIHTKVSKKEALDMALQLMKDVGIPNAEEHINDYPHQWSGGMR
QRAVIAIALAADPEILIADEPTTALDVTIQAQILRLMKKIQEERDSSIIFITHDLGVVAGMADRVAVMYAGKILEYGTVD
EVFYNPQHPYTWGLLNSMPTIETESGSLEAIPGTPPDLLYPPKGDAFAPRNVFALAIDYQEEPPMFKVSDTHFAATWLLD
ERAPKVTPPSPILKRWEKWSKMKEK

Nucleotide

• Length: 1038 bp

>NTDB_id=1131235 H1X08_RS08915 WP_232086215.1 1737639..1738676(-) (oppD) [Streptococcus thermophilus isolate STH_CIRM_961]
ATGAAAGAAACGGTTTTAAGTGTAAAAAATCTCCATGTTAATTTTCATACTTACGCTGGAGAAGTAAAAGCGATTCGTGA
TGTCAATTTTGACTTGAAAAAAGGTGAGACACTGGCAATTGTTGGTGAGTCTGGCTCAGGAAAATCTGTAATGACAAGGA
CATTAATGGGTCTATCAGAGAAAAACGCTAAGGTAACTGGAGACATTACCTTTAAAGGGCGCGATATGCAAGCCTTGAGG
GAGGAAGATTGGGTCAAGGTCCGTGGAAATGATATTGCTATGATTTTTCAAGATCCTATGACCAGTCTTGACCCTACTAT
GAAAATTGGGCTCCAAATTGCTGAGCCTATTATGATTCATACCAAAGTATCTAAGAAAGAAGCTTTAGATATGGCTTTAC
AATTAATGAAAGATGTTGGGATACCTAATGCCGAAGAACATATAAATGACTACCCTCACCAATGGTCAGGAGGAATGCGT
CAAAGAGCAGTAATTGCCATTGCTCTAGCTGCAGATCCTGAAATTTTGATTGCTGACGAGCCTACTACAGCTTTAGATGT
TACGATTCAAGCACAAATTCTTCGTCTGATGAAAAAAATCCAAGAAGAGCGTGATTCATCCATTATTTTTATTACTCATG
ACTTGGGTGTTGTCGCTGGGATGGCTGATCGTGTAGCGGTTATGTATGCTGGCAAAATTTTGGAATATGGGACTGTGGAT
GAGGTTTTCTATAATCCGCAACACCCATACACATGGGGACTTCTTAACTCTATGCCTACAATAGAAACAGAATCTGGCAG
CCTAGAAGCTATTCCAGGAACTCCTCCAGATTTGCTTTATCCTCCTAAAGGTGATGCCTTTGCTCCTCGAAATGTCTTTG
CTTTAGCTATTGATTATCAGGAAGAACCGCCAATGTTTAAAGTATCAGATACGCATTTTGCAGCAACATGGCTCTTAGAT
GAACGAGCTCCTAAAGTAACCCCTCCTTCGCCAATATTGAAACGATGGGAAAAATGGTCAAAGATGAAGGAGAAATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (26-182)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (234-295)

3D structure

• AlphaFold DB: A0A7U7C721

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	80.702	99.13	0.8
amiE	Streptococcus salivarius strain HSISS4	56.932	98.261	0.559
amiE	Streptococcus thermophilus LMG 18311	56.342	98.261	0.554
amiE	Streptococcus thermophilus LMD-9	56.342	98.261	0.554