Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   H0513_RS02530 Genome accession   NZ_LR822023
Coordinates   462853..463296 (+) Length   147 a.a.
NCBI ID   WP_179972686.1    Uniprot ID   A0A7U7H0S3
Organism   Streptococcus thermophilus isolate STH_CIRM_368     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 457853..468296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0513_RS02510 (STHERMO_0512) - 458399..459160 (-) 762 WP_179972684.1 NUDIX domain-containing protein -
  H0513_RS02515 - 459224..460215 (-) 992 Protein_435 AAA family ATPase -
  H0513_RS02520 (STHERMO_0515) gdhA 460643..461995 (+) 1353 WP_179972685.1 NADP-specific glutamate dehydrogenase -
  H0513_RS02525 (STHERMO_0516) - 462253..462663 (+) 411 WP_100285038.1 peptide deformylase -
  H0513_RS02530 (STHERMO_0517) rcrR 462853..463296 (+) 444 WP_179972686.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  H0513_RS02535 (STHERMO_0518) rcrP 463300..465114 (+) 1815 WP_179972687.1 ABC transporter ATP-binding protein Regulator
  H0513_RS02540 (STHERMO_0519) rcrQ 465104..466882 (+) 1779 WP_179972688.1 ABC transporter ATP-binding protein Regulator
  H0513_RS02545 (STHERMO_0520) - 467039..467476 (+) 438 WP_232086205.1 GNAT family acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 16983.43 Da        Isoelectric Point: 9.3636

>NTDB_id=1131139 H0513_RS02530 WP_179972686.1 462853..463296(+) (rcrR) [Streptococcus thermophilus isolate STH_CIRM_368]
MHGKDPFSDFREFINIMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKKLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKCVHLTDLGKKKAQDVGHFREAIHGQLLDGISKEDAETAFRVFHQIRKNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=1131139 H0513_RS02530 WP_179972686.1 462853..463296(+) (rcrR) [Streptococcus thermophilus isolate STH_CIRM_368]
ATGCATGGAAAAGATCCTTTTAGTGACTTCAGAGAATTCATCAATATTATGGAGTCTCGCGTGCAAGAGTTAGGTAAAGC
GTATGGTGTTGAGCATTTAGCTGGTCCACAAGGGTTTGCCGTTAGGTACTTGTTTGAGAACCAAGATAAAGAGATATTTA
TCAAAGATATTGAGAAAAAACTATCTATTTCCAAGTCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTGTGTTCATCTGACAGACTTAGGCAAAAAGAAGGCTCAAGA
CGTCGGACATTTCCGAGAGGCTATCCATGGACAGTTATTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCATTTCGAG
TCTTTCACCAAATTCGTAAGAATTTAGAGAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(42-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7H0S3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

56.028

95.918

0.537

Multiple sequence alignment