Detailed information NTG1131117

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: H0514_RS09155
• Genome accession: NZ_LR822020
• Coordinates: 1782496..1783533 (-)
• Length: 345 a.a.
• NCBI ID: WP_232086215.1
• Uniprot ID: A0A7U7C721
• Organism: Streptococcus thermophilus isolate STH_CIRM_956
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1777496..1788533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0514_RS09130 (STHERMO_2098)	-	1778104..1778967 (-)	864	WP_011226821.1	Rgg/GadR/MutR family transcriptional regulator	-
H0514_RS09135 (STHERMO_2099)	dusB	1779170..1780147 (-)	978	WP_179972558.1	tRNA dihydrouridine synthase DusB	-
H0514_RS09140 (STHERMO_2100)	hslO	1780140..1781006 (-)	867	WP_100262322.1	Hsp33 family molecular chaperone HslO	-
H0514_RS10955 (STHERMO_2101)	-	1781281..1781442 (-)	162	WP_232086214.1	hypothetical protein	-
H0514_RS09150 (STHERMO_2102)	amiF	1781556..1782494 (-)	939	WP_100262323.1	ABC transporter ATP-binding protein	Regulator
H0514_RS09155 (STHERMO_2103)	oppD	1782496..1783533 (-)	1038	WP_232086215.1	ABC transporter ATP-binding protein	Regulator
H0514_RS09160 (STHERMO_2104)	-	1783550..1784581 (-)	1032	WP_258380588.1	ABC transporter permease	-
H0514_RS09165 (STHERMO_2105)	-	1784592..1785506 (-)	915	WP_179972557.1	ABC transporter permease	-
H0514_RS09170 (STHERMO_2106)	-	1785637..1787283 (-)	1647	WP_179973219.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 38503.48 Da
• Isoelectric Point: 5.4595

>NTDB_id=1131117 H0514_RS09155 WP_232086215.1 1782496..1783533(-) (oppD) [Streptococcus thermophilus isolate STH_CIRM_956]
MKETVLSVKNLHVNFHTYAGEVKAIRDVNFDLKKGETLAIVGESGSGKSVMTRTLMGLSEKNAKVTGDITFKGRDMQALR
EEDWVKVRGNDIAMIFQDPMTSLDPTMKIGLQIAEPIMIHTKVSKKEALDMALQLMKDVGIPNAEEHINDYPHQWSGGMR
QRAVIAIALAADPEILIADEPTTALDVTIQAQILRLMKKIQEERDSSIIFITHDLGVVAGMADRVAVMYAGKILEYGTVD
EVFYNPQHPYTWGLLNSMPTIETESGSLEAIPGTPPDLLYPPKGDAFAPRNVFALAIDYQEEPPMFKVSDTHFAATWLLD
ERAPKVTPPSPILKRWEKWSKMKEK

Nucleotide

• Length: 1038 bp

>NTDB_id=1131117 H0514_RS09155 WP_232086215.1 1782496..1783533(-) (oppD) [Streptococcus thermophilus isolate STH_CIRM_956]
ATGAAAGAAACGGTTTTAAGTGTAAAAAATCTCCATGTTAATTTTCATACTTACGCTGGAGAAGTAAAAGCGATTCGTGA
TGTCAATTTTGACTTGAAAAAAGGTGAGACACTGGCAATTGTTGGTGAGTCTGGCTCAGGAAAATCTGTAATGACAAGGA
CATTAATGGGTCTATCAGAGAAAAACGCTAAGGTAACTGGAGACATTACCTTTAAAGGGCGCGATATGCAAGCCTTGAGG
GAGGAAGATTGGGTCAAGGTCCGTGGAAATGATATTGCTATGATTTTTCAAGATCCTATGACCAGTCTTGACCCTACTAT
GAAAATTGGGCTCCAAATTGCTGAGCCTATTATGATTCATACCAAAGTATCTAAGAAAGAAGCTTTAGATATGGCTTTAC
AATTAATGAAAGATGTTGGGATACCTAATGCCGAAGAACATATAAATGACTACCCTCACCAATGGTCAGGAGGAATGCGT
CAAAGAGCAGTAATTGCCATTGCTCTAGCTGCAGATCCTGAAATTTTGATTGCTGACGAGCCTACTACAGCTTTAGATGT
TACGATTCAAGCACAAATTCTTCGTCTGATGAAAAAAATCCAAGAAGAGCGTGATTCATCCATTATTTTTATTACTCATG
ACTTGGGTGTTGTCGCTGGGATGGCTGATCGTGTAGCGGTTATGTATGCTGGCAAAATTTTGGAATATGGGACTGTGGAT
GAGGTTTTCTATAATCCGCAACACCCATACACATGGGGACTTCTTAACTCTATGCCTACAATAGAAACAGAATCTGGCAG
CCTAGAAGCTATTCCAGGAACTCCTCCAGATTTGCTTTATCCTCCTAAAGGTGATGCCTTTGCTCCTCGAAATGTCTTTG
CTTTAGCTATTGATTATCAGGAAGAACCGCCAATGTTTAAAGTATCAGATACGCATTTTGCAGCAACATGGCTCTTAGAT
GAACGAGCTCCTAAAGTAACCCCTCCTTCGCCAATATTGAAACGATGGGAAAAATGGTCAAAGATGAAGGAGAAATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (26-182)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (234-295)

3D structure

• AlphaFold DB: A0A7U7C721

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	80.702	99.13	0.8
amiE	Streptococcus salivarius strain HSISS4	56.932	98.261	0.559
amiE	Streptococcus thermophilus LMG 18311	56.342	98.261	0.554
amiE	Streptococcus thermophilus LMD-9	56.342	98.261	0.554