Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   H0510_RS07515 Genome accession   NZ_LR822019
Coordinates   1442221..1443297 (-) Length   358 a.a.
NCBI ID   WP_022096499.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_772     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1437221..1448297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0510_RS07495 (STHERMO_1657) - 1438333..1440399 (-) 2067 WP_179966776.1 cation:proton antiporter -
  H0510_RS07500 (STHERMO_1658) - 1440408..1440650 (-) 243 WP_011226461.1 hypothetical protein -
  H0510_RS07505 (STHERMO_1659) - 1440647..1441195 (-) 549 WP_011226462.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  H0510_RS07510 (STHERMO_1660) - 1441192..1442136 (-) 945 WP_179966777.1 TIGR01212 family radical SAM protein -
  H0510_RS07515 (STHERMO_1661) sepM 1442221..1443297 (-) 1077 WP_022096499.1 SepM family pheromone-processing serine protease Regulator
  H0510_RS07520 (STHERMO_1662) coaD 1443275..1443772 (-) 498 WP_022096498.1 pantetheine-phosphate adenylyltransferase -
  H0510_RS07525 (STHERMO_1663) rsmD 1443806..1444405 (-) 600 Protein_1446 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  H0510_RS07530 (STHERMO_1664) trxB 1444496..1445449 (-) 954 WP_260215147.1 thioredoxin-disulfide reductase -
  H0510_RS07535 (STHERMO_1665) - 1445482..1445706 (-) 225 WP_002951743.1 DUF4059 family protein -
  H0510_RS07540 (STHERMO_1666) - 1445921..1446664 (-) 744 WP_164178279.1 amino acid ABC transporter ATP-binding protein -
  H0510_RS07545 (STHERMO_1667) - 1446664..1447410 (-) 747 WP_095559509.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39202.09 Da        Isoelectric Point: 9.4944

>NTDB_id=1131043 H0510_RS07515 WP_022096499.1 1442221..1443297(-) (sepM) [Streptococcus thermophilus isolate STH_CIRM_772]
MANKTKSKSLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=1131043 H0510_RS07515 WP_022096499.1 1442221..1443297(-) (sepM) [Streptococcus thermophilus isolate STH_CIRM_772]
GTGGCAAACAAGACAAAATCTAAATCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAATCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAAGACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCTGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterproScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.05

95.251

0.601


Multiple sequence alignment