Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   BAMY6639_RS16415 Genome accession   NZ_CP006058
Coordinates   3358410..3359066 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens UMAF6639     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3353410..3364066
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMY6639_RS16390 (BAMY6639_17170) oppF 3353940..3354857 (+) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -
  BAMY6639_RS16395 (BAMY6639_17175) - 3354964..3356151 (+) 1188 WP_076982893.1 putative glycoside hydrolase -
  BAMY6639_RS16400 (BAMY6639_17180) - 3356269..3356847 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  BAMY6639_RS16405 (BAMY6639_17185) spx 3357025..3357420 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  BAMY6639_RS16410 (BAMY6639_17190) - 3357478..3358134 (-) 657 WP_007409109.1 TerC family protein -
  BAMY6639_RS16415 (BAMY6639_17195) mecA 3358410..3359066 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  BAMY6639_RS16420 (BAMY6639_17205) - 3359217..3360377 (+) 1161 WP_061861354.1 competence protein CoiA family protein -
  BAMY6639_RS16425 (BAMY6639_17210) pepF 3360605..3362434 (+) 1830 WP_148660081.1 oligoendopeptidase F Regulator
  BAMY6639_RS20420 (BAMY6639_17215) - 3362472..3362639 (-) 168 WP_003155026.1 hypothetical protein -
  BAMY6639_RS16430 (BAMY6639_17220) spxH 3362925..3363827 (-) 903 WP_039251990.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=113003 BAMY6639_RS16415 WP_003155032.1 3358410..3359066(+) (mecA) [Bacillus amyloliquefaciens UMAF6639]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=113003 BAMY6639_RS16415 WP_003155032.1 3358410..3359066(+) (mecA) [Bacillus amyloliquefaciens UMAF6639]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895

Multiple sequence alignment