Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   GWJ69_RS17135 Genome accession   NZ_LR745045
Coordinates   3423888..3424484 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae isolate Kpn2166     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3418888..3429484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GWJ69_RS17120 helD 3419096..3421150 (-) 2055 WP_004213261.1 DNA helicase IV -
  GWJ69_RS17125 - 3421275..3421721 (+) 447 WP_002898425.1 YccF domain-containing protein -
  GWJ69_RS17130 yccS 3421739..3423874 (+) 2136 WP_004213263.1 YccS family putative transporter -
  GWJ69_RS17135 sxy/tfoX 3423888..3424484 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  GWJ69_RS17140 sulA 3424833..3425342 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  GWJ69_RS17145 ompA 3425695..3426765 (+) 1071 WP_002898408.1 porin OmpA -
  GWJ69_RS17150 matP 3426898..3427350 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  GWJ69_RS17155 - 3427536..3429293 (+) 1758 WP_004147851.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1129850 GWJ69_RS17135 WP_004150836.1 3423888..3424484(-) (sxy/tfoX) [Klebsiella pneumoniae isolate Kpn2166]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1129850 GWJ69_RS17135 WP_004150836.1 3423888..3424484(-) (sxy/tfoX) [Klebsiella pneumoniae isolate Kpn2166]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAAGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment