Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   GW691_RS16670 Genome accession   NZ_LR745042
Coordinates   3344819..3345415 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae isolate Klebsiella pneumoniae kpn154     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3339819..3350415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GW691_RS16655 helD 3340027..3342081 (-) 2055 WP_004213261.1 DNA helicase IV -
  GW691_RS16660 - 3342206..3342652 (+) 447 WP_002898425.1 YccF domain-containing protein -
  GW691_RS16665 yccS 3342670..3344805 (+) 2136 WP_004213263.1 YccS family putative transporter -
  GW691_RS16670 sxy/tfoX 3344819..3345415 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  GW691_RS16675 sulA 3345764..3346273 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  GW691_RS16680 ompA 3346626..3347696 (+) 1071 WP_002898408.1 porin OmpA -
  GW691_RS16685 matP 3347829..3348281 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  GW691_RS16690 - 3348467..3350224 (+) 1758 WP_004147851.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1129826 GW691_RS16670 WP_004150836.1 3344819..3345415(-) (sxy/tfoX) [Klebsiella pneumoniae isolate Klebsiella pneumoniae kpn154]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1129826 GW691_RS16670 WP_004150836.1 3344819..3345415(-) (sxy/tfoX) [Klebsiella pneumoniae isolate Klebsiella pneumoniae kpn154]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAAGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment