Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | G3R42_RS25380 | Genome accession | NZ_LR739068 |
| Coordinates | 5451140..5451697 (+) | Length | 185 a.a. |
| NCBI ID | WP_003102600.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain PcyII-29 isolate PcyII-29 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5446140..5456697
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3R42_RS25360 (PERCYII29_5077) | pilR | 5447416..5448753 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| G3R42_RS25365 (PERCYII29_5078) | thiO | 5448799..5449893 (-) | 1095 | WP_020750388.1 | glycine oxidase ThiO | - |
| G3R42_RS25370 (PERCYII29_5079) | - | 5450028..5450537 (+) | 510 | WP_003102595.1 | GspH/FimT family pseudopilin | - |
| G3R42_RS25375 (PERCYII29_5080) | - | 5450643..5451149 (+) | 507 | WP_003102598.1 | GspH/FimT family pseudopilin | - |
| G3R42_RS25380 (PERCYII29_5081) | pilV | 5451140..5451697 (+) | 558 | WP_003102600.1 | type 4a pilus minor pilin PilV | Machinery gene |
| G3R42_RS25385 (PERCYII29_5082) | pilW | 5451694..5452518 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| G3R42_RS25390 (PERCYII29_5083) | pilX | 5452515..5453102 (+) | 588 | WP_003102605.1 | type 4a pilus minor pilin PilX | - |
| G3R42_RS25395 (PERCYII29_5084) | pilY1 | 5453114..5456605 (+) | 3492 | WP_003102607.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20047.13 Da Isoelectric Point: 8.2254
>NTDB_id=1129660 G3R42_RS25380 WP_003102600.1 5451140..5451697(+) (pilV) [Pseudomonas aeruginosa strain PcyII-29 isolate PcyII-29]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVDRNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVDRNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1129660 G3R42_RS25380 WP_003102600.1 5451140..5451697(+) (pilV) [Pseudomonas aeruginosa strain PcyII-29 isolate PcyII-29]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGATCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGATCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |