Detailed information NTG1129317

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QOY30_RS04355
• Genome accession: NZ_LR699166
• Coordinates: 901280..902227 (-)
• Length: 315 a.a.
• NCBI ID: WP_283743410.1
• Uniprot ID: -
• Organism: Sideroxydans sp. CL21 isolate Sideroxydans sp. CL21
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 896280..907227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOY30_RS04320 (SIDCL21_0895)	-	896290..896724 (+)	435	WP_283743403.1	CZB domain-containing protein	-
QOY30_RS04325 (SIDCL21_0896)	-	896930..897115 (-)	186	WP_283743404.1	hypothetical protein	-
QOY30_RS04330 (SIDCL21_0897)	-	897219..898199 (-)	981	WP_283743405.1	2Fe-2S iron-sulfur cluster-binding protein	-
QOY30_RS04335 (SIDCL21_0898)	-	898213..898578 (-)	366	WP_283743406.1	group 1 truncated hemoglobin	-
QOY30_RS04340 (SIDCL21_0899)	-	898795..899253 (+)	459	WP_283743407.1	Rrf2 family transcriptional regulator	-
QOY30_RS04345 (SIDCL21_0900)	ftsX	899722..900633 (-)	912	WP_283743408.1	permease-like cell division protein FtsX	-
QOY30_RS04350 (SIDCL21_0901)	ftsE	900630..901283 (-)	654	WP_283743409.1	cell division ATP-binding protein FtsE	-
QOY30_RS04355 (SIDCL21_0902)	pilA	901280..902227 (-)	948	WP_283743410.1	signal recognition particle-docking protein FtsY	Machinery gene
QOY30_RS04360 (SIDCL21_0903)	-	902306..903664 (+)	1359	WP_283743411.1	pitrilysin family protein	-
QOY30_RS04365 (SIDCL21_0904)	-	903654..905021 (+)	1368	WP_283743412.1	pitrilysin family protein	-
QOY30_RS04370 (SIDCL21_0905)	rsmD	905032..905553 (+)	522	WP_349496703.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QOY30_RS04375 (SIDCL21_0906)	coaD	905550..906026 (+)	477	WP_283743413.1	pantetheine-phosphate adenylyltransferase	-
QOY30_RS04380 (SIDCL21_0907)	-	906038..906292 (+)	255	WP_283743414.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 315 a.a.
• Molecular weight: 33449.60 Da
• Isoelectric Point: 6.9223

>NTDB_id=1129317 QOY30_RS04355 WP_283743410.1 901280..902227(-) (pilA) [Sideroxydans sp. CL21 isolate Sideroxydans sp. CL21]
MFSFLKKTPASAESTNWLARLTNGLARTGGQLTALLVPGGRIDEDLYEELETILITADVGMDATRSLLADVRRHVKEERL
TEAGQLKEALAHALFKMLQPLAQPLDASAHKPFVIMLCGVNGAGKTTSIGKLAKHFQGQGKSVLLAAGDTFRAAAREQLM
EWGKRNGVTVIAQQSGDAAAVIYDAVQAAQARGIDIVLADTAGRLTTQAHLMEEIKKVKRVIAKALPDAPHEVLLVLDAN
TGQNALSQVKAFDDALNVTGLVLTKLDGTAKGGVIAAIAKAHPIPVRFIGVGEGLDDLRPFMAEDFVDALLGHGQ

Nucleotide

• Length: 948 bp

>NTDB_id=1129317 QOY30_RS04355 WP_283743410.1 901280..902227(-) (pilA) [Sideroxydans sp. CL21 isolate Sideroxydans sp. CL21]
ATGTTTAGTTTTCTGAAAAAAACTCCCGCCTCCGCCGAATCGACAAACTGGCTAGCCCGCTTGACGAATGGCTTGGCGCG
CACAGGTGGACAGCTCACTGCCCTGCTGGTTCCCGGCGGCAGGATAGACGAAGATCTTTACGAAGAGCTGGAGACCATTC
TCATTACCGCCGATGTGGGCATGGATGCAACGCGTTCGCTGCTGGCTGATGTGCGTCGCCATGTGAAGGAGGAGCGGTTG
ACTGAAGCCGGCCAATTGAAGGAAGCGCTGGCGCACGCCCTGTTCAAGATGTTGCAGCCGCTGGCGCAACCCCTGGATGC
CAGCGCGCACAAGCCTTTCGTCATCATGCTGTGCGGCGTCAACGGCGCGGGCAAGACCACCTCCATTGGCAAACTGGCCA
AACACTTCCAGGGCCAGGGGAAATCGGTGCTGCTGGCTGCAGGCGACACCTTCCGCGCTGCGGCCCGCGAACAACTCATG
GAATGGGGCAAGCGCAACGGCGTCACCGTGATTGCGCAGCAAAGCGGCGATGCTGCCGCAGTGATTTATGACGCAGTGCA
GGCTGCACAGGCACGCGGTATCGACATCGTACTGGCAGATACCGCCGGACGCCTGACCACGCAAGCGCACCTGATGGAAG
AAATCAAAAAAGTGAAGCGCGTGATCGCCAAGGCCTTGCCCGATGCACCGCATGAGGTACTGCTGGTGCTGGACGCCAAC
ACCGGACAGAACGCGCTATCGCAAGTCAAAGCTTTCGATGATGCGCTGAATGTCACCGGACTGGTGCTGACCAAACTCGA
TGGCACTGCCAAAGGCGGCGTCATCGCCGCCATCGCCAAGGCGCATCCGATTCCAGTACGCTTCATCGGCGTGGGGGAAG
GATTGGACGATTTACGGCCGTTCATGGCTGAAGATTTTGTAGACGCACTACTTGGCCACGGACAATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (112-312)

• SRP54-type protein, helical bundle domain (SRP54_N) (30-94)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	67.224	94.921	0.638