Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   M395_RS05415 Genome accession   NZ_CP006030
Coordinates   1114965..1116233 (+) Length   422 a.a.
NCBI ID   WP_002338823.1    Uniprot ID   A0A4Y3JME5
Organism   Enterococcus faecium T110     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1109965..1121233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M395_RS05390 (M395_05540) tsf 1110700..1111581 (+) 882 WP_002293878.1 translation elongation factor Ts -
  M395_RS05395 (M395_05545) pyrH 1111718..1112440 (+) 723 WP_002293877.1 UMP kinase -
  M395_RS05400 (M395_05550) frr 1112443..1113000 (+) 558 WP_002293875.1 ribosome recycling factor -
  M395_RS05405 (M395_05555) - 1113195..1114007 (+) 813 WP_002400345.1 isoprenyl transferase -
  M395_RS05410 (M395_05560) - 1114004..1114804 (+) 801 WP_002400343.1 phosphatidate cytidylyltransferase -
  M395_RS05415 (M395_05565) eeP 1114965..1116233 (+) 1269 WP_002338823.1 RIP metalloprotease RseP Regulator
  M395_RS05420 (M395_05570) - 1116301..1118010 (+) 1710 WP_002314809.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46047.51 Da        Isoelectric Point: 4.8405

>NTDB_id=112907 M395_RS05415 WP_002338823.1 1114965..1116233(+) (eeP) [Enterococcus faecium T110]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIETDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIIPNGAAAEAGLKENDKVVSVDGKEIHSWN
DLTTVITKNPGKTLDFEIEREGKMQSVDVTPKSVESNGEKVGQLGIQAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVIGLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=112907 M395_RS05415 WP_002338823.1 1114965..1116233(+) (eeP) [Enterococcus faecium T110]
ATGAAAACGATACTAACATTTATCATTGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAGATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGTATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCAATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGGGATGAAACAG
AAGTAGTGACCTATCCTGTTGATCACGATGCGACGATTATTGAAACCGACGGAACAGAAATCAGAATTGCACCAAAAGAT
GTACAGTTCCAATCGGCTAAACTGTGGCAGCGTATGCTGACCAATTTTGCCGGTCCGATGAATAACTTTATCTTGGCAAT
CGTGTTATTCATTATTCTTGCATTCATGCAAGGCGGTGTTCAAGTGACAAATACTAATCGTGTAGGAGAGATTATCCCTA
ATGGTGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATAAGGTAGTTAGTGTGGACGGTAAAGAAATCCACTCTTGGAAC
GATTTGACAACAGTCATCACGAAAAATCCAGGTAAAACATTAGATTTTGAGATCGAACGAGAAGGTAAGATGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGCATACAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATCGGCGGAACACGTCAAGCTTTTAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTGTTT
ACAGGTTTTAGTTTAGATAAATTAGGCGGACCTGTTATGATGTACCAATTGTCTTCAGAAGCAGCAAACCAAGGTGTAAC
AACTGTTATTGGTTTGATGGCGCTTCTTTCAATGAACCTTGGAATCGTCAATTTGCTTCCGATCCCTGCCTTAGATGGTG
GAAAATTAGTCTTGAATATTTTTGAAGGGATTCGTGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTGATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(199-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y3JME5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.972

100

0.547
  eeP Streptococcus thermophilus LMG 18311

53.738

100

0.545

Multiple sequence alignment