Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FXZ10_RS14935 Genome accession   NZ_LR698965
Coordinates   2975563..2976513 (-) Length   316 a.a.
NCBI ID   WP_052653285.1    Uniprot ID   A0A098EQH8
Organism   Planococcus massiliensis isolate MGYG-HGUT-01482     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2970563..2981513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FXZ10_RS14910 - 2970986..2972053 (-) 1068 WP_052653275.1 ABC transporter permease -
  FXZ10_RS14915 - 2972212..2972514 (-) 303 WP_052653277.1 antibiotic biosynthesis monooxygenase family protein -
  FXZ10_RS14920 - 2972881..2973840 (-) 960 WP_052653279.1 siderophore ABC transporter substrate-binding protein -
  FXZ10_RS14925 - 2973862..2974623 (-) 762 WP_052653281.1 ABC transporter ATP-binding protein -
  FXZ10_RS14930 - 2974620..2975570 (-) 951 WP_052653283.1 iron chelate uptake ABC transporter family permease subunit -
  FXZ10_RS14935 ceuB 2975563..2976513 (-) 951 WP_052653285.1 ABC transporter permease Machinery gene
  FXZ10_RS14940 - 2976764..2977630 (-) 867 WP_234398976.1 DUF6612 family protein -
  FXZ10_RS14945 - 2977781..2979502 (+) 1722 WP_052653287.1 ABC transporter ATP-binding protein -
  FXZ10_RS14950 hflX 2979607..2980878 (-) 1272 WP_052653289.1 GTPase HflX -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34777.06 Da        Isoelectric Point: 9.9779

>NTDB_id=1128726 FXZ10_RS14935 WP_052653285.1 2975563..2976513(-) (ceuB) [Planococcus massiliensis isolate MGYG-HGUT-01482]
MKKRYLIPALIILSVISLFVGVSSISIIDLLDFQSEETQIFLISRLPRLVAILLAGAGMSMAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANASMLEKMAVAFAFALAGTFLFMQILDRIKFKDAIFIPLVGLMFGNILSSITTFFAYKADVI
QNMSAWLQGDFSMIMKGSYELLYISIPVFIIAYIYANRFTVAGMGEDFSKNLGLKYRSVVNIGLVLVALITATVVLTVGM
IPFLGLIIPNIVSIFKGDHLQKTLPHTAMLGAIFLLACDILGRVLIYPYEISISLMVGVIGSFIFLFLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1128726 FXZ10_RS14935 WP_052653285.1 2975563..2976513(-) (ceuB) [Planococcus massiliensis isolate MGYG-HGUT-01482]
ATGAAAAAACGTTATTTAATACCAGCACTGATCATACTGTCTGTTATTTCGCTGTTTGTCGGCGTCAGCAGTATCAGCAT
CATTGATCTGCTCGACTTCCAATCGGAGGAGACGCAGATTTTCCTGATCAGCCGTCTGCCAAGGCTGGTCGCCATATTGT
TGGCGGGTGCAGGGATGAGTATGGCAGGACTCATCATGCAGCAACTGAGCCGCAATAAATTTGTGTCTCCGACGACGGCA
GGTACACTCGATGCCACTCGACTGGGGATTCTCGTCTCGATGCTATTGTTCGCCAATGCTTCGATGCTTGAGAAAATGGC
AGTGGCATTCGCATTTGCACTTGCCGGAACGTTTCTGTTTATGCAAATTCTTGACCGCATCAAATTCAAAGATGCTATAT
TCATCCCGTTAGTCGGACTGATGTTCGGAAATATCCTTTCATCCATTACGACATTCTTCGCTTATAAAGCGGATGTCATC
CAAAACATGTCGGCATGGCTGCAGGGTGATTTTTCGATGATCATGAAAGGGAGCTATGAGCTTCTCTACATCAGCATTCC
GGTCTTTATCATCGCGTATATTTATGCAAACCGCTTTACCGTAGCCGGAATGGGAGAAGATTTCTCGAAGAACCTTGGAT
TGAAATACCGTAGTGTTGTCAATATCGGCCTGGTGCTTGTGGCATTGATTACCGCAACTGTCGTCTTGACGGTCGGTATG
ATTCCGTTTCTTGGGTTGATCATCCCGAATATCGTTTCGATTTTCAAAGGCGATCACCTTCAAAAAACATTGCCGCACAC
GGCGATGCTTGGGGCCATTTTCTTGCTGGCATGCGATATTTTAGGAAGAGTATTAATTTACCCGTATGAAATTTCCATCA
GTTTAATGGTCGGTGTCATCGGCAGCTTTATTTTCCTCTTCCTTCTGTTTAGGAGGAAAGCCTATGCGTGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A098EQH8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.674

99.051

0.532

Multiple sequence alignment