Detailed information NTG1128666

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: FXY05_RS01260
• Genome accession: NZ_LR698956
• Coordinates: 253371..254684 (+)
• Length: 437 a.a.
• NCBI ID: WP_000653547.1
• Uniprot ID: -
• Organism: Helicobacter pylori isolate MGYG-HGUT-01357
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 248371..259684

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FXY05_RS01240	crdR	248691..249332 (+)	642	WP_001169806.1	copper response regulator transcription factor CrdR	-
FXY05_RS01245	crdS	249298..250500 (+)	1203	WP_080005285.1	copper-sensing histidine kinase CrdS	-
FXY05_RS01250	-	250503..251897 (+)	1395	WP_000954081.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	-
FXY05_RS01255	-	251908..253374 (+)	1467	WP_000349774.1	replicative DNA helicase	-
FXY05_RS01260	comEC/comE3	253371..254684 (+)	1314	WP_000653547.1	ComEC/Rec2 family competence protein	Machinery gene
FXY05_RS01265	mqnP	254713..255597 (+)	885	WP_000913966.1	menaquinone biosynthesis prenyltransferase MqnP	-
FXY05_RS01270	-	255590..256084 (+)	495	WP_014534527.1	hypothetical protein	-
FXY05_RS01275	-	256097..256600 (+)	504	WP_000953081.1	DUF6115 domain-containing protein	-
FXY05_RS01280	-	256597..257403 (+)	807	WP_000561111.1	phosphatidylserine decarboxylase	-
FXY05_RS01285	nadA	257390..258400 (+)	1011	WP_001141984.1	quinolinate synthase NadA	-
FXY05_RS01290	nadC	258400..259221 (+)	822	WP_000404035.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50156.08 Da
• Isoelectric Point: 9.8572

>NTDB_id=1128666 FXY05_RS01260 WP_000653547.1 253371..254684(+) (comEC/comE3) [Helicobacter pylori isolate MGYG-HGUT-01357]
MKDKTFQGAFELLATPKEYLLCGVVLSLLLALNLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLRSCFFQTYSFSLTRKQDFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTLLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQTFFKTSSFLVRSFQVISLS
ALVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFVVFFPLSLFLHAVGLGSLLDSILNMPLTIPTISVSSPLWLLGVHLFLT
ILSVRFFKVYLSMNVLSTGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=1128666 FXY05_RS01260 WP_000653547.1 253371..254684(+) (comEC/comE3) [Helicobacter pylori isolate MGYG-HGUT-01357]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTGCAACCCCCAAAGAATACTTGTTGTGTGGGGTTGTTTTAAG
CCTTTTGTTAGCGCTCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAAATCAAACCTTGCTC
ATTTTTGGAGTCTTTAAGATCATGCTTTTTTCAAACTTATTCGTTTTCTTTAACACGAAAACAAGATTTCAAATCGCATT
GGCGCCATTTCATTGATAGCGCTCATTCAAGCGCTTTAGTGGGCAATTTGTATCGGGCGTTGTTTATAGGGGATAGCTTG
AATAAAGACTTAAGGGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTCCTTTTCTCTCTTTTTTATACCCTCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAGCTTTTGATTTTAGCGTG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAACCTTTTTTAAAACTTCTTCTTTTTTGGTGCGATCTTTTCAAGTCATAAGCTTAAGC
GCGCTAGTGTTTTTGAACATGCTCATCATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAACTCTTTAGCATTCC
TTTAGGCTTGATTTTTGTCGTGTTTTTCCCTTTGAGTTTGTTTTTGCATGCTGTGGGTTTGGGGTCTTTGCTGGATAGCA
TTTTAAACATGCCTTTAACAATCCCTACGATTTCGGTTTCTTCGCCTTTATGGCTTTTGGGGGTGCATTTATTTTTAACG
ATTCTAAGCGTGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCACGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.737	100	0.947