Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FORC1_RS01545 Genome accession   NZ_CP009554
Coordinates   351325..352170 (+) Length   281 a.a.
NCBI ID   WP_001663091.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FORC_001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 346325..357170
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC1_RS01530 (FORC1_0290) - 346591..348432 (-) 1842 WP_000077311.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  FORC1_RS01535 (FORC1_0291) metC 348401..349561 (-) 1161 WP_000175858.1 cystathionine beta-lyase MetC -
  FORC1_RS01540 (FORC1_0292) - 349558..350661 (-) 1104 WP_000655687.1 PLP-dependent transferase -
  FORC1_RS01545 (FORC1_0293) spo0J 351325..352170 (+) 846 WP_001663091.1 ParB/RepB/Spo0J family partition protein Regulator
  FORC1_RS01550 (FORC1_0294) - 352324..353205 (+) 882 WP_000373076.1 mechanosensitive ion channel family protein -
  FORC1_RS01555 (FORC1_0295) - 353235..353438 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  FORC1_RS01560 (FORC1_0296) ychF 353450..354547 (+) 1098 WP_001663090.1 redox-regulated ATPase YchF -
  FORC1_RS01565 (FORC1_0297) - 354633..354824 (-) 192 WP_001052483.1 hypothetical protein -
  FORC1_RS01570 (FORC1_0298) rpsF 355068..355364 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  FORC1_RS01575 (FORC1_0299) ssb 355385..355888 (+) 504 WP_000934799.1 single-stranded DNA-binding protein -
  FORC1_RS01580 (FORC1_0300) rpsR 355940..356182 (+) 243 WP_000897044.1 30S ribosomal protein S18 -
  FORC1_RS01585 (FORC1_0301) - 356414..357133 (-) 720 WP_000400841.1 type II toxin-antitoxin system PemK/MazF family toxin -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32810.90 Da        Isoelectric Point: 10.1158

>NTDB_id=112862 FORC1_RS01545 WP_001663091.1 351325..352170(+) (spo0J) [Staphylococcus aureus strain FORC_001]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNISSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIKQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=112862 FORC1_RS01545 WP_001663091.1 351325..352170(+) (spo0J) [Staphylococcus aureus strain FORC_001]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CGCAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATATTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCGCAAGATGA
CTTTGTGAGAATCATTAAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381

Multiple sequence alignment