Detailed information NTG1128546

Bioinformatically predicted

Overview

• Name: rcrP
• Type: Regulator
• Locus tag: BILO16373828_RS01565
• Genome accession: NZ_LR655210
• Coordinates: 357161..359032 (+)
• Length: 623 a.a.
• NCBI ID: WP_012578654.1
• Uniprot ID: B7GP93
• Organism: Bifidobacterium longum subsp. infantis isolate B.longum_ssp_infantis_6
• Function: regulate competence (predicted from homology) Competence regulation

Genomic Context

Location: 352161..364032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BILO16373828_RS01555 (FQ349_RS01555)	-	354718..356241 (+)	1524	WP_012578656.1	amino acid permease	-
BILO16373828_RS01560 (FQ349_RS01560)	-	356395..356925 (+)	531	WP_012578655.1	MarR family winged helix-turn-helix transcriptional regulator	-
BILO16373828_RS01565 (FQ349_RS01565)	rcrP	357161..359032 (+)	1872	WP_012578654.1	ABC transporter ATP-binding protein	Regulator
BILO16373828_RS01570 (FQ349_RS01570)	rcrQ	359100..360938 (+)	1839	WP_012578653.1	ABC transporter ATP-binding protein	Regulator
BILO16373828_RS01575 (FQ349_RS01575)	-	361090..362115 (-)	1026	WP_012578652.1	FAD:protein FMN transferase	-
BILO16373828_RS01585 (FQ349_RS01585)	-	362472..363608 (-)	1137	WP_012577358.1	IS256-like element ISBlo17 family transposase	-

Sequence

Protein

• Length: 623 a.a.
• Molecular weight: 68025.59 Da
• Isoelectric Point: 5.4498

>NTDB_id=1128546 BILO16373828_RS01565 WP_012578654.1 357161..359032(+) (rcrP) [Bifidobacterium longum subsp. infantis isolate B.longum_ssp_infantis_6]
MFRIMKYLSKAEIGQMLVALLTIVGQVYFDLKLPDYMSDITTLVETPGSDMKDIWIAGGKMLLISLGSVACAVITGYIAA
RVAASFTQRLRSLEFRKVESFGPAEMSKFSTASLITRSTNDITQVQMFITMGLQLIVKSPIMAVWAVCKIAGEGFEWTLA
TGIAVAVLLVSITVMMAMVMPKFKAMQALTDNINLVARENLTGLRVVRAYNAEDYQESKFTKANKDLTETQLFTNRVMAF
MMPLMNTVLNGLMLAVYWIGAYLIDAAGLKDKLTVFSNMVVFSNYSVQVIMSFLLMSMVFVLWPRADVSAQRIMEVLDTE
PIVGNGTKTAADVAKTGQRGTVEFRNVGFTYPDSREAMLEGISFTATQGQTVAFIGSTGSGKSSLINLVPRFYDVSEGQV
LVDGVDVRDYDLKTLRDKIGYVPQQSVLFKGTVASNVSYGDQPGDPAEVEMTDSSTASGRKHETALLAADKAAQDAGLPA
ERMERVKAAADVAQASEFVARMDGGYAAAIAQGGSNVSGGQKQRLSIARAVYRHPEILIFDDSFSALDFKTDREVRDALA
REAKDSIKLIVAQRIGTIMNADRIVVLDDGKVVGQGTHRELLEHCDVYRQIAESQLSQSELTA

Nucleotide

• Length: 1872 bp

>NTDB_id=1128546 BILO16373828_RS01565 WP_012578654.1 357161..359032(+) (rcrP) [Bifidobacterium longum subsp. infantis isolate B.longum_ssp_infantis_6]
ATGTTCCGCATCATGAAATACCTCTCCAAAGCGGAGATCGGTCAGATGCTCGTCGCCCTGCTGACCATCGTCGGGCAGGT
CTACTTCGACCTGAAACTGCCCGACTACATGTCAGACATCACCACCTTGGTCGAGACGCCGGGCAGCGACATGAAGGACA
TCTGGATCGCGGGCGGCAAGATGCTGCTCATCTCGCTCGGCTCCGTGGCGTGCGCCGTCATCACCGGCTACATAGCCGCG
CGCGTGGCCGCCTCGTTCACCCAGCGTCTGCGCTCGCTCGAATTCCGCAAGGTCGAATCCTTCGGACCGGCCGAGATGAG
CAAGTTCTCCACGGCCAGCCTCATCACCCGCTCCACCAACGACATCACGCAGGTGCAGATGTTCATCACCATGGGTCTGC
AGCTCATCGTCAAGTCGCCGATCATGGCCGTATGGGCCGTATGCAAGATCGCCGGCGAAGGCTTCGAATGGACGCTCGCC
ACCGGCATCGCCGTGGCGGTCCTGCTGGTGTCCATCACCGTCATGATGGCCATGGTCATGCCGAAGTTCAAGGCGATGCA
GGCCCTGACCGACAACATCAACCTCGTGGCCCGCGAAAACCTCACCGGCCTGCGCGTGGTGCGCGCCTACAATGCCGAGG
ACTACCAGGAGTCCAAGTTCACCAAGGCCAACAAGGACCTCACCGAAACCCAGCTGTTCACCAACCGCGTCATGGCGTTC
ATGATGCCGCTGATGAACACCGTCCTGAATGGTCTGATGCTCGCCGTCTACTGGATCGGCGCCTACCTGATCGACGCCGC
CGGGCTCAAGGACAAGCTCACCGTGTTCTCCAACATGGTCGTGTTCTCCAACTACTCCGTGCAGGTCATCATGAGCTTCC
TGCTCATGAGCATGGTGTTCGTGCTCTGGCCGCGCGCCGACGTTTCGGCGCAGCGCATCATGGAAGTGCTCGACACCGAG
CCGATCGTCGGCAACGGCACCAAGACCGCCGCCGACGTGGCCAAGACCGGCCAGCGCGGCACCGTGGAATTCCGCAACGT
CGGCTTCACCTACCCGGACTCGCGCGAAGCGATGCTCGAAGGCATCAGCTTCACCGCCACGCAAGGCCAGACCGTGGCGT
TCATCGGCTCCACCGGCTCCGGCAAATCGTCGCTGATCAACCTCGTGCCGCGCTTCTATGACGTCAGCGAAGGCCAGGTG
CTGGTCGACGGCGTGGACGTGCGCGACTACGACCTGAAGACCCTGCGCGACAAGATCGGCTACGTGCCGCAGCAGTCCGT
GCTGTTCAAGGGCACCGTGGCCTCCAACGTGAGCTATGGCGATCAGCCGGGCGACCCGGCGGAGGTCGAGATGACGGACA
GCTCCACCGCCTCCGGCCGCAAGCACGAGACCGCACTGCTCGCCGCGGACAAGGCCGCGCAGGACGCCGGCCTGCCGGCC
GAGCGGATGGAGCGCGTCAAGGCCGCCGCCGACGTGGCGCAGGCCAGCGAATTCGTGGCGCGCATGGACGGCGGATACGC
CGCCGCGATCGCACAGGGCGGCTCGAACGTGTCCGGCGGCCAGAAGCAGCGACTGTCCATCGCACGCGCGGTGTACCGGC
ATCCGGAGATCCTGATCTTCGACGACTCGTTCTCCGCGCTCGACTTCAAGACCGACCGCGAGGTGCGCGACGCGCTCGCC
CGCGAAGCCAAGGACTCCATCAAACTCATCGTGGCCCAGCGCATCGGCACCATCATGAACGCCGACCGCATCGTCGTGCT
CGACGACGGCAAGGTCGTGGGCCAGGGCACGCACCGGGAACTGCTCGAACACTGCGACGTATACCGCCAGATCGCCGAAT
CCCAGCTCAGCCAGTCGGAGCTTACGGCGTAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (54-292)

• ABC transporter (ABC_tran) (359-543)

3D structure

• AlphaFold DB: B7GP93

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrP	Streptococcus mutans UA159	48.499	100	0.493