Detailed information    

insolico Bioinformatically predicted

Overview


Name   pepF   Type   Regulator
Locus tag   FQT45_RS02990 Genome accession   NZ_LR595858
Coordinates   578748..580550 (+) Length   600 a.a.
NCBI ID   WP_077322105.1    Uniprot ID   A0A4U9XI35
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context


Location: 573748..585550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS02965 (NCTC10228_00598) queA 573791..574819 (-) 1029 WP_077322097.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  FQT45_RS02970 (NCTC10228_00599) nagB 574993..575703 (+) 711 WP_007894732.1 glucosamine-6-phosphate deaminase -
  FQT45_RS02975 (NCTC10228_00600) - 575770..576486 (+) 717 WP_077322099.1 pseudouridine synthase -
  FQT45_RS02980 (NCTC10228_00601) - 576580..577725 (+) 1146 WP_077322101.1 MFS transporter -
  FQT45_RS02985 (NCTC10228_00602) - 577788..578738 (+) 951 WP_077322103.1 competence protein CoiA -
  FQT45_RS02990 (NCTC10228_00603) pepF 578748..580550 (+) 1803 WP_077322105.1 oligoendopeptidase F Regulator
  FQT45_RS02995 (NCTC10228_00604) - 580627..581268 (+) 642 WP_077322107.1 HAD family hydrolase -
  FQT45_RS03000 (NCTC10228_00605) - 581436..582143 (+) 708 WP_172604972.1 O-methyltransferase -
  FQT45_RS03005 (NCTC10228_00606) prsA 582206..583147 (+) 942 WP_077322112.1 peptidylprolyl isomerase PrsA -

Sequence


Protein


Download         Length: 600 a.a.        Molecular weight: 69974.13 Da        Isoelectric Point: 4.7422

>NTDB_id=1128477 FQT45_RS02990 WP_077322105.1 578748..580550(+) (pepF) [Streptococcus pseudoporcinus strain NCTC10228]
MADNRSHLEEKYTWDLTTIFDSDQKWETEVNDLKIDLERAQTLAGHLLDSAKNLLETTEIQLDLSRRIEKVYVYAHMKND
QDTTVAKYQEYQSKASALYARFSEVFSFYEPEFMTILPSQFDDFLKEEPRLEDYHHFFEKLLKNKEHVLSQAEEELLAGA
QEIFNGAEETFGLLDNADIQFPIIKDEKGQEIEITHGNFIHLMESKDRQVRQAAYEALYSTYEQFQHTYAKTLQTNVKVN
NYKARVHHYTSARQAAMAANFIPEAVYDTLLEVVNRKLPLLHRYLELRKKILGLETLKMYDVYTPLSQTDLSVNYDQALE
KAEEVLSIFGKEYRDYVHQAFSERWIDVHVNKGKRSGAYSGGSYDTKAFMLLNWQDNLDNLYTLVHETGHSLHSTLTRKN
QPYVYGDYSIFLAEIASTTNENILTEALLKDVTDEKERFAILNNYLDGFRGTIFRQSQFAEFEHAIYQADQAGDVLTSDY
LNNLYGQLNEKYYGLAKEDNYYIQYEWARIPHFYYNYYVYQYATGFAAASYLANKIVHGQQKDIDNYLSYLKAGNSDYPL
NVIAKAGVDMTNEVYLEDAFTIFEERLTELEALVEKGVHL

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1128477 FQT45_RS02990 WP_077322105.1 578748..580550(+) (pepF) [Streptococcus pseudoporcinus strain NCTC10228]
ATGGCAGATAATAGAAGTCATTTAGAAGAAAAATACACATGGGATTTGACTACTATCTTTGACAGTGATCAAAAATGGGA
AACGGAAGTTAATGACTTAAAAATAGATCTAGAAAGAGCTCAGACTTTAGCTGGACACCTTTTAGATTCAGCAAAAAATT
TATTGGAAACAACGGAAATCCAGTTGGATTTATCAAGACGTATTGAAAAGGTCTATGTCTACGCTCACATGAAAAATGAC
CAAGATACGACTGTTGCAAAATACCAGGAATACCAATCAAAAGCATCCGCTTTATATGCGAGGTTTAGTGAAGTTTTTTC
ATTTTATGAGCCAGAATTTATGACTATTCTTCCAAGCCAATTTGACGATTTTCTTAAGGAAGAACCTAGGTTGGAAGATT
ATCATCATTTCTTTGAAAAGCTTCTTAAAAATAAAGAACATGTTCTTAGTCAAGCTGAGGAAGAATTGTTAGCTGGTGCT
CAAGAAATTTTTAATGGTGCTGAAGAGACCTTTGGCCTTTTAGACAATGCTGATATTCAATTTCCAATTATCAAAGATGA
AAAAGGACAAGAGATTGAAATTACGCACGGTAATTTTATCCATTTGATGGAATCTAAAGATCGTCAAGTGCGTCAAGCTG
CTTATGAAGCCTTATACAGTACTTATGAGCAATTTCAACATACTTATGCTAAAACACTTCAAACCAATGTTAAAGTAAAC
AATTACAAGGCGCGTGTTCATCATTATACGTCTGCTCGTCAAGCAGCCATGGCCGCAAACTTTATTCCTGAAGCAGTTTA
CGATACTCTTTTAGAAGTTGTTAACCGTAAGCTCCCATTACTGCATCGGTATTTAGAGTTAAGAAAAAAAATATTAGGTC
TAGAGACCTTAAAAATGTATGATGTCTATACACCCTTATCTCAAACAGACCTATCTGTCAATTATGATCAAGCTTTGGAA
AAAGCCGAGGAAGTCTTATCTATTTTCGGAAAAGAGTATAGGGATTATGTTCATCAAGCTTTTTCTGAAAGATGGATTGA
TGTCCATGTTAATAAAGGAAAAAGATCTGGTGCTTATTCAGGTGGGTCTTACGATACCAAAGCCTTTATGCTATTAAACT
GGCAGGATAATTTAGATAATCTCTATACTTTGGTGCATGAAACGGGCCATAGTTTACATTCGACTTTAACACGTAAGAAC
CAACCTTATGTTTATGGAGATTACAGTATATTTTTAGCAGAGATTGCTTCAACGACGAATGAAAACATTTTAACTGAGGC
ATTATTGAAAGATGTTACAGATGAAAAAGAACGCTTTGCTATTCTAAATAATTATTTAGACGGCTTTAGAGGAACTATTT
TCCGCCAAAGCCAATTTGCTGAATTTGAGCATGCTATTTATCAGGCTGACCAAGCTGGTGACGTCTTAACAAGTGATTAT
TTAAATAACTTATATGGACAATTGAATGAAAAATATTATGGTTTAGCTAAGGAAGACAACTACTATATTCAATATGAATG
GGCGCGGATTCCTCACTTCTATTACAATTACTATGTTTATCAATATGCAACAGGTTTTGCGGCGGCAAGCTATCTAGCAA
ACAAAATTGTTCATGGGCAACAAAAGGATATTGATAACTATCTGTCTTATCTTAAAGCCGGCAATTCTGATTACCCATTG
AATGTTATAGCAAAAGCCGGAGTGGATATGACTAACGAAGTTTATTTAGAAGATGCCTTTACTATTTTTGAAGAACGTCT
TACAGAATTAGAGGCTCTAGTTGAGAAGGGGGTCCATCTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9XI35

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

70.5

100

0.705


Multiple sequence alignment