Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FQT45_RS02600 Genome accession   NZ_LR595858
Coordinates   496830..497873 (+) Length   347 a.a.
NCBI ID   WP_077323511.1    Uniprot ID   A0A4U9XHT5
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 491830..502873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS02575 (NCTC10228_00520) arcC 491905..492855 (+) 951 WP_007892664.1 carbamate kinase -
  FQT45_RS02580 (NCTC10228_00521) - 492961..494487 (-) 1527 WP_077353901.1 IS1182 family transposase -
  FQT45_RS02585 (NCTC10228_00522) asnA 494729..495721 (+) 993 WP_007894038.1 aspartate--ammonia ligase -
  FQT45_RS02590 (NCTC10228_00523) rsmD 495823..496362 (+) 540 WP_077323509.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FQT45_RS02595 (NCTC10228_00524) coaD 496352..496843 (+) 492 WP_077323510.1 pantetheine-phosphate adenylyltransferase -
  FQT45_RS02600 (NCTC10228_00525) sepM 496830..497873 (+) 1044 WP_077323511.1 SepM family pheromone-processing serine protease Regulator
  FQT45_RS02605 (NCTC10228_00526) - 498100..499083 (+) 984 WP_077323512.1 LacI family DNA-binding transcriptional regulator -
  FQT45_RS02610 (NCTC10228_00527) - 499076..499987 (+) 912 WP_077323513.1 ribokinase -
  FQT45_RS02615 (NCTC10228_00528) rbsD 499962..500360 (+) 399 WP_077323514.1 D-ribose pyranase -
  FQT45_RS02620 (NCTC10228_00529) - 500376..501854 (+) 1479 WP_077323515.1 sugar ABC transporter ATP-binding protein -
  FQT45_RS02625 (NCTC10228_00530) - 501857..502801 (+) 945 WP_077323516.1 ABC transporter permease subunit -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 38365.34 Da        Isoelectric Point: 10.1350

>NTDB_id=1128474 FQT45_RS02600 WP_077323511.1 496830..497873(+) (sepM) [Streptococcus pseudoporcinus strain NCTC10228]
MKIIKKVKWWLISILAVVALLFALFFPLPYYIEMPGGAYDIRSVLKVNDKRDKEKGSYNFVAVSLSRATFAQILYAWVTP
FTEISSLENTTGGYSATDYMRINQYYMETSQNGAIYQALQLAGKPVSLDYLGVYVLDVNKESTFRGILNIADTVTGVNQK
EFKSSTELIKYVSSLKRGETVTVQYTSGNEKKSKSGKVIKLKNGKNGIGIGLTDHTKVHTDEKIEFSTEGVGGPSAGLMF
TLDIYDQLNQENLRKGRRIAGTGTIDQDGKVGDIGGAGLKVVAAANEGADIFFVPNNPVDKRIKKVKPNAKTNYKEALEV
AKKIKTKMKIVPVRNVKEAIAYLQKTK

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1128474 FQT45_RS02600 WP_077323511.1 496830..497873(+) (sepM) [Streptococcus pseudoporcinus strain NCTC10228]
ATGAAGATAATTAAAAAAGTTAAATGGTGGTTAATTAGTATTCTGGCAGTAGTTGCCCTCTTGTTTGCCCTCTTTTTCCC
TTTACCTTATTATATTGAGATGCCTGGTGGAGCTTACGATATTCGTTCAGTACTTAAGGTAAACGATAAAAGGGATAAGG
AGAAAGGCTCTTATAATTTTGTGGCGGTCAGTTTGAGTCGAGCCACTTTTGCTCAAATTCTCTATGCTTGGGTAACGCCA
TTCACAGAGATTTCATCTTTGGAAAATACAACTGGTGGCTATAGTGCGACAGATTATATGCGCATCAATCAATATTACAT
GGAGACCTCTCAAAACGGAGCTATCTATCAAGCCTTACAATTAGCTGGGAAACCTGTTTCTTTAGACTACCTAGGTGTTT
ATGTTTTGGATGTCAATAAAGAGTCTACTTTTCGTGGTATTCTAAATATTGCTGATACTGTTACAGGAGTCAATCAAAAA
GAATTTAAGAGTTCAACTGAACTTATTAAATACGTTTCAAGTTTGAAACGGGGTGAAACAGTGACGGTGCAATATACCAG
CGGTAATGAGAAAAAATCTAAAAGTGGCAAGGTTATTAAGCTAAAAAATGGGAAGAATGGTATTGGAATTGGCTTAACGG
ACCACACAAAAGTCCATACAGATGAAAAGATTGAGTTTTCGACAGAAGGTGTAGGTGGGCCAAGTGCTGGGCTTATGTTT
ACACTGGATATTTATGATCAACTAAATCAAGAAAACCTGCGTAAAGGTCGTCGTATTGCTGGTACTGGAACGATTGATCA
AGATGGCAAAGTTGGTGATATTGGTGGTGCGGGATTAAAAGTTGTTGCTGCAGCTAACGAAGGGGCTGATATTTTCTTTG
TACCCAACAATCCAGTTGATAAACGGATCAAAAAAGTAAAACCAAATGCAAAGACCAATTATAAAGAAGCCTTGGAAGTC
GCTAAAAAAATAAAAACCAAGATGAAAATTGTTCCCGTTAGAAATGTTAAAGAAGCTATTGCTTACTTGCAAAAGACAAA
ATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9XHT5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.884

99.424

0.715


Multiple sequence alignment