Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FQT67_RS10200 Genome accession   NZ_LR595857
Coordinates   2050226..2050939 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus sp. NCTC 11567 strain NCTC11567     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2045226..2055939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT67_RS10190 (NCTC11567_02110) treC 2046296..2047924 (-) 1629 WP_002991331.1 alpha,alpha-phosphotrehalase -
  FQT67_RS10195 (NCTC11567_02111) treP 2047991..2050015 (-) 2025 WP_046177141.1 PTS system trehalose-specific EIIBC component -
  FQT67_RS10200 (NCTC11567_02112) treR 2050226..2050939 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  FQT67_RS10210 (NCTC11567_02113) - 2051221..2051559 (-) 339 WP_046177142.1 helix-turn-helix domain-containing protein -
  FQT67_RS10215 (NCTC11567_02114) - 2051746..2052603 (+) 858 WP_046177143.1 VOC family protein -
  FQT67_RS10220 (NCTC11567_02115) yaaA 2052645..2053376 (+) 732 WP_022555238.1 peroxide stress protein YaaA -
  FQT67_RS10225 (NCTC11567_02116) nrdG 2053549..2054163 (-) 615 WP_003058750.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  FQT67_RS10230 (NCTC11567_02117) - 2054167..2054670 (-) 504 WP_003058815.1 GNAT family N-acetyltransferase -
  FQT67_RS10235 (NCTC11567_02118) - 2054679..2055614 (-) 936 WP_046177144.1 Gfo/Idh/MocA family oxidoreductase -
  FQT67_RS10840 (NCTC11567_02119) - 2055643..2055789 (-) 147 WP_003053094.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1128453 FQT67_RS10200 WP_002982243.1 2050226..2050939(+) (treR) [Streptococcus sp. NCTC 11567 strain NCTC11567]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1128453 FQT67_RS10200 WP_002982243.1 2050226..2050939(+) (treR) [Streptococcus sp. NCTC 11567 strain NCTC11567]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment