Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FQT67_RS08810 Genome accession   NZ_LR595857
Coordinates   1752563..1753288 (-) Length   241 a.a.
NCBI ID   WP_003057032.1    Uniprot ID   A0A9X5LWD8
Organism   Streptococcus sp. NCTC 11567 strain NCTC11567     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1747563..1758288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT67_RS08780 (NCTC11567_01821) - 1748335..1748640 (+) 306 WP_046176848.1 membrane protein -
  FQT67_RS08785 (NCTC11567_01822) - 1748757..1749836 (+) 1080 WP_046176849.1 tyrosine-type recombinase/integrase -
  FQT67_RS08795 (NCTC11567_01824) trmB 1750035..1750670 (-) 636 WP_046176850.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FQT67_RS08800 (NCTC11567_01825) - 1750670..1751461 (-) 792 WP_003052472.1 phosphotransferase family protein -
  FQT67_RS08805 (NCTC11567_01826) - 1751526..1752560 (-) 1035 WP_046176851.1 ABC transporter permease -
  FQT67_RS08810 (NCTC11567_01827) pptA 1752563..1753288 (-) 726 WP_003057032.1 ABC transporter ATP-binding protein Regulator
  FQT67_RS08815 (NCTC11567_01828) - 1753360..1753779 (+) 420 WP_046176852.1 HIT family protein -
  FQT67_RS08820 (NCTC11567_01829) - 1753776..1754105 (+) 330 WP_003057072.1 hypothetical protein -
  FQT67_RS08825 (NCTC11567_01830) - 1754263..1755531 (-) 1269 WP_046176853.1 LCP family protein -
  FQT67_RS08830 (NCTC11567_01831) - 1755543..1756064 (-) 522 WP_046176854.1 GNAT family N-acetyltransferase -
  FQT67_RS08835 (NCTC11567_01832) tsaE 1756057..1756500 (-) 444 WP_014612541.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FQT67_RS08840 (NCTC11567_01833) - 1756677..1758137 (-) 1461 WP_143936416.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26416.65 Da        Isoelectric Point: 4.6450

>NTDB_id=1128445 FQT67_RS08810 WP_003057032.1 1752563..1753288(-) (pptA) [Streptococcus sp. NCTC 11567 strain NCTC11567]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLTADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLELEKGKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1128445 FQT67_RS08810 WP_003057032.1 1752563..1753288(-) (pptA) [Streptococcus sp. NCTC 11567 strain NCTC11567]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATTTCGATTGATGGACTAACCTTGACTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTGGCTATGGCCTATGATATTGATGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATCTGTGCTTTTGTGATTGATCCAAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGCTTGAAAAAGGCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTAAGGGCTCAGG
GAACGCTTGCTGACCTGCAGGATGCCTTCGGTGATGCTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

99.17

0.747
  pptA Streptococcus thermophilus LMD-9

74.477

99.17

0.739

Multiple sequence alignment