Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FQT67_RS07165 Genome accession   NZ_LR595857
Coordinates   1428379..1429416 (-) Length   345 a.a.
NCBI ID   WP_015057897.1    Uniprot ID   A0A9X9R3T4
Organism   Streptococcus sp. NCTC 11567 strain NCTC11567     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1423379..1434416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT67_RS07140 (NCTC11567_01482) rbsC 1423401..1424342 (-) 942 WP_046177544.1 ribose ABC transporter permease -
  FQT67_RS07145 (NCTC11567_01483) - 1424344..1425822 (-) 1479 WP_046177543.1 sugar ABC transporter ATP-binding protein -
  FQT67_RS07150 (NCTC11567_01484) rbsD 1425838..1426236 (-) 399 WP_003061114.1 D-ribose pyranase -
  FQT67_RS07155 (NCTC11567_01485) rbsK 1426211..1427122 (-) 912 WP_003061715.1 ribokinase -
  FQT67_RS07160 (NCTC11567_01486) - 1427115..1428098 (-) 984 WP_003053684.1 LacI family DNA-binding transcriptional regulator -
  FQT67_RS07165 (NCTC11567_01487) sepM 1428379..1429416 (-) 1038 WP_015057897.1 SepM family pheromone-processing serine protease Regulator
  FQT67_RS07170 (NCTC11567_01488) coaD 1429403..1429894 (-) 492 WP_003051905.1 pantetheine-phosphate adenylyltransferase -
  FQT67_RS07175 (NCTC11567_01489) rsmD 1429884..1430423 (-) 540 WP_041781651.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FQT67_RS07180 (NCTC11567_01490) asnA 1430617..1431609 (-) 993 WP_003061055.1 aspartate--ammonia ligase -
  FQT67_RS07185 (NCTC11567_01491) arcC 1431935..1432885 (-) 951 WP_012767309.1 carbamate kinase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37589.15 Da        Isoelectric Point: 9.4270

>NTDB_id=1128438 FQT67_RS07165 WP_015057897.1 1428379..1429416(-) (sepM) [Streptococcus sp. NCTC 11567 strain NCTC11567]
MKTIKKIKWWLISLIALVALLIVLFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDISKDSTFKGTLNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSADKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKDGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1128438 FQT67_RS07165 WP_015057897.1 1428379..1429416(-) (sepM) [Streptococcus sp. NCTC 11567 strain NCTC11567]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAGTCTAATTGCCCTCGTGGCTCTGCTTATCGTCCTTTTTTTCCC
TCTTCCTTATTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGATACCACAGGCGGTTATAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTAT
ATGTGTTAGATATTAGCAAGGATTCAACCTTTAAAGGTACTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGACAAAATCGAGTTTAGTACCCAAGGTGTTGGGGGTCCTAGCGCAGGCTTAATGTTT
ACATTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACCATTGGTAA
AGATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.884

100

0.719


Multiple sequence alignment