Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E5P1_RS10675 Genome accession   NZ_LR594689
Coordinates   2140901..2141299 (-) Length   132 a.a.
NCBI ID   WP_068683500.1    Uniprot ID   A0A2J7VR93
Organism   Variovorax sp. WDL1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2135901..2146299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5P1_RS10660 (G3W93_RS10685) - 2137598..2139937 (-) 2340 WP_068683494.1 methyl-accepting chemotaxis protein -
  E5P1_RS10665 (G3W93_RS10690) - 2139979..2140506 (-) 528 WP_068683496.1 chemotaxis protein CheW -
  E5P1_RS10670 (G3W93_RS10695) - 2140536..2140901 (-) 366 WP_068683498.1 response regulator -
  E5P1_RS10675 (G3W93_RS10700) pilG 2140901..2141299 (-) 399 WP_068683500.1 response regulator Regulator
  E5P1_RS10680 (G3W93_RS10705) - 2141378..2141548 (-) 171 WP_083944691.1 rubredoxin -
  E5P1_RS10685 (G3W93_RS10710) - 2141658..2142617 (+) 960 WP_068683501.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  E5P1_RS10690 (G3W93_RS10715) hemL 2142635..2143930 (+) 1296 WP_068683503.1 glutamate-1-semialdehyde 2,1-aminomutase -
  E5P1_RS10695 (G3W93_RS10720) purH 2143963..2145540 (-) 1578 WP_068683505.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  E5P1_RS10700 (G3W93_RS10725) - 2145545..2145781 (-) 237 WP_068683508.1 Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14644.76 Da        Isoelectric Point: 7.3215

>NTDB_id=1128263 E5P1_RS10675 WP_068683500.1 2140901..2141299(-) (pilG) [Variovorax sp. WDL1]
MSSNGSGYKVLVIDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKVNDHKPHLIFCDILMPRLDGYQTCAIIKRNAHFS
SVPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGVVSQEVQ

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1128263 E5P1_RS10675 WP_068683500.1 2140901..2141299(-) (pilG) [Variovorax sp. WDL1]
ATGAGCTCGAATGGATCCGGTTACAAGGTTCTCGTCATCGACGACAGCAACACCATCCGGCGCAGTGCCGAAATCTTTCT
CAAGCAAGGCGGCCATGAGGTGTTGCTGGCAGAGGACGGTTTTGACGCGCTGTCGAAGGTCAACGACCATAAGCCGCACC
TGATCTTCTGCGACATTCTCATGCCGCGCCTCGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCCCACTTCTCC
AGCGTCCCGGTTGTGATGCTGTCCTCCAAGGATGGCGTATTCGACAAGGCGCGCGGCCGCATGGTCGGCTCCCAGGACTA
CCTCACCAAACCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGCAGCAGTTCGGCGTCGTTTCGCAGGAAGTGCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2J7VR93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

61.404

86.364

0.53

Multiple sequence alignment