Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   WDLP6_RS22740 Genome accession   NZ_LR594671
Coordinates   4649022..4649420 (-) Length   132 a.a.
NCBI ID   WP_162569384.1    Uniprot ID   A0A8B6LT09
Organism   Variovorax sp. PBL-E5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4644022..4654420
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WDLP6_RS22725 (E5CHR_04538) - 4645745..4648069 (-) 2325 WP_162594182.1 methyl-accepting chemotaxis protein -
  WDLP6_RS22730 (E5CHR_04539) - 4648110..4648643 (-) 534 WP_162594183.1 chemotaxis protein CheW -
  WDLP6_RS22735 (E5CHR_04540) - 4648657..4649022 (-) 366 WP_162569383.1 response regulator -
  WDLP6_RS22740 (E5CHR_04541) pilG 4649022..4649420 (-) 399 WP_162569384.1 response regulator Regulator
  WDLP6_RS22745 (G3W90_RS22750) - 4649500..4649670 (-) 171 WP_093109554.1 rubredoxin -
  WDLP6_RS22750 (E5CHR_04542) - 4649781..4650740 (+) 960 WP_162594184.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  WDLP6_RS22755 (E5CHR_04543) hemL 4650877..4652166 (+) 1290 WP_174259894.1 glutamate-1-semialdehyde 2,1-aminomutase -
  WDLP6_RS22760 (E5CHR_04544) - 4652173..4652640 (+) 468 WP_162594185.1 hypothetical protein -
  WDLP6_RS22765 (E5CHR_04545) purH 4652666..4654249 (-) 1584 WP_162594186.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14683.84 Da        Isoelectric Point: 8.5040

>NTDB_id=1128234 WDLP6_RS22740 WP_162569384.1 4649022..4649420(-) (pilG) [Variovorax sp. PBL-E5]
MSANGSGYKVLVIDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKVNDHKPHLIFCDILMPRLDGYQTCAIIKRNSHFS
NVPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLNAVQQFGIVQQKAQ

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1128234 WDLP6_RS22740 WP_162569384.1 4649022..4649420(-) (pilG) [Variovorax sp. PBL-E5]
ATGAGCGCGAATGGATCCGGATACAAGGTGCTGGTCATCGACGACAGCAACACGATTCGGCGCAGCGCCGAAATCTTCCT
CAAGCAAGGCGGCCATGAAGTCCTGCTGGCCGAGGACGGCTTCGACGCCTTGTCCAAGGTCAACGATCACAAGCCGCACC
TCATCTTCTGCGACATCCTGATGCCGCGCCTCGACGGCTACCAGACCTGCGCGATCATCAAGCGCAATTCCCATTTTTCC
AATGTCCCTGTCGTTATGCTGTCGTCCAAGGACGGCGTGTTCGACAAGGCGCGCGGCCGTATGGTCGGCTCGCAGGACTA
TCTCACCAAACCCTTCACCAAAGACCAACTGCTGAATGCCGTGCAGCAGTTCGGCATCGTTCAGCAGAAAGCGCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A8B6LT09

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.158

86.364

0.545

Multiple sequence alignment