Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E5P2_RS22590 Genome accession   NZ_LR594666
Coordinates   4669584..4669982 (-) Length   132 a.a.
NCBI ID   WP_162569384.1    Uniprot ID   A0A8B6LT09
Organism   Variovorax sp. SRS16     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4664584..4674982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5P2_RS22575 (G3W92_RS22560) - 4666307..4668631 (-) 2325 WP_162569381.1 methyl-accepting chemotaxis protein -
  E5P2_RS22580 (G3W92_RS22565) - 4668672..4669205 (-) 534 WP_162569382.1 chemotaxis protein CheW -
  E5P2_RS22585 (G3W92_RS22570) - 4669219..4669584 (-) 366 WP_162569383.1 response regulator -
  E5P2_RS22590 (G3W92_RS22575) pilG 4669584..4669982 (-) 399 WP_162569384.1 response regulator Regulator
  E5P2_RS22595 (G3W92_RS22580) - 4670062..4670232 (-) 171 WP_093109554.1 rubredoxin -
  E5P2_RS22600 (G3W92_RS22585) - 4670343..4671302 (+) 960 WP_162569385.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  E5P2_RS22605 (G3W92_RS22590) hemL 4671439..4672728 (+) 1290 WP_174262690.1 glutamate-1-semialdehyde 2,1-aminomutase -
  E5P2_RS22610 (G3W92_RS22595) - 4672739..4673206 (+) 468 WP_162569386.1 hypothetical protein -
  E5P2_RS22615 (G3W92_RS22600) purH 4673224..4674807 (-) 1584 WP_162569387.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14683.84 Da        Isoelectric Point: 8.5040

>NTDB_id=1128213 E5P2_RS22590 WP_162569384.1 4669584..4669982(-) (pilG) [Variovorax sp. SRS16]
MSANGSGYKVLVIDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKVNDHKPHLIFCDILMPRLDGYQTCAIIKRNSHFS
NVPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLNAVQQFGIVQQKAQ

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1128213 E5P2_RS22590 WP_162569384.1 4669584..4669982(-) (pilG) [Variovorax sp. SRS16]
ATGAGCGCGAATGGATCCGGATACAAGGTGCTGGTCATCGACGACAGCAACACGATTCGGCGCAGCGCCGAAATCTTCCT
CAAGCAAGGTGGCCATGAAGTCCTGCTGGCCGAGGACGGCTTCGACGCCTTGTCCAAGGTCAACGACCACAAGCCGCACC
TCATTTTCTGTGACATCCTGATGCCGCGCCTCGACGGCTACCAGACCTGCGCGATCATCAAGCGCAATTCCCATTTTTCC
AATGTCCCTGTCGTTATGCTGTCGTCCAAGGACGGCGTGTTCGACAAGGCGCGCGGCCGCATGGTCGGCTCGCAGGACTA
TCTCACCAAACCCTTCACCAAAGACCAACTGCTGAATGCCGTGCAGCAGTTCGGCATCGTTCAGCAGAAAGCGCAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A8B6LT09

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.158

86.364

0.545

Multiple sequence alignment