Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | FGL20_RS09190 | Genome accession | NZ_LR594050 |
| Coordinates | 1856388..1858829 (-) | Length | 813 a.a. |
| NCBI ID | WP_093959022.1 | Uniprot ID | A0A4V0HD83 |
| Organism | Streptococcus porcinus strain NCTC10925 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1851388..1863829
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL20_RS09180 (NCTC10925_01847) | groL | 1854286..1855914 (-) | 1629 | WP_003084572.1 | chaperonin GroEL | - |
| FGL20_RS09185 (NCTC10925_01848) | groES | 1855956..1856246 (-) | 291 | WP_039984709.1 | co-chaperone GroES | - |
| FGL20_RS09190 (NCTC10925_01849) | clpC | 1856388..1858829 (-) | 2442 | WP_093959022.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| FGL20_RS09195 (NCTC10925_01850) | - | 1858829..1859290 (-) | 462 | WP_003085318.1 | CtsR family transcriptional regulator | - |
| FGL20_RS09200 | - | 1859461..1859664 (-) | 204 | WP_003085753.1 | cold-shock protein | - |
| FGL20_RS09205 (NCTC10925_01852) | - | 1860013..1860282 (+) | 270 | WP_003083519.1 | hypothetical protein | - |
| FGL20_RS09210 (NCTC10925_01853) | - | 1860285..1862354 (+) | 2070 | WP_093959023.1 | cation:proton antiporter | - |
| FGL20_RS09215 (NCTC10925_01854) | - | 1862473..1863435 (+) | 963 | WP_093959024.1 | ring-cleaving dioxygenase | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90237.72 Da Isoelectric Point: 5.6873
>NTDB_id=1128064 FGL20_RS09190 WP_093959022.1 1856388..1858829(-) (clpC) [Streptococcus porcinus strain NCTC10925]
MIDYSLKMQEIFKQAQYQAARFDSQYLETWHLLLAMVVVNNSLAGLVFNEFDDKVAIEEYEAAAILAMGQTPNDDVKEWA
LKGQSRTLTKILQFSDAIRQVTGAQEVGSEHVLFAILLNPDVMAARLLEMAGFKLRDEGQGDLKISDLRKAIERQAAYSK
EIIKAIYELRKPKKSKAGGTFSDMMKPASSAGELSDFTRDLTQMASQGLLEPVIGRDKEITRMVQVLSRKTKNNPVLVGD
AGVGKTALAYGLAQRIVEGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIIDDIEADGKIILFVDELHTIMGSGS
GIDSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKILIEEPSLEDAYKILLGLKSSYEMYHNVSISD
QAVKVAVKVAHRYLTSKNLPDSAIDLLDEASATVQGLIKKETPSFLSPIDQAILDGNFKKVASLLKAGQKTKPNPTPVTE
DDIMATLSKLSGIPLEKISQADSQKYLRLEEELHKRVIGQDEAISAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAEVLFDDESALIRFDMSEYMEKFSASRLNGAPPGYVGYDEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFTNTIIIMTSNLGATALRDDKTVGFGARDISQDHQAMEKRILEELKKAYRPEFINRIDEKVVFHS
LTQDDMQQVVRIMVKPLVAALEEKGIALKFQPSALKYLSEKGYDIEMGARPLRRTIQTEVEDKLSELLLSGQLASGNKLK
VGLTKGKIKCDIE
MIDYSLKMQEIFKQAQYQAARFDSQYLETWHLLLAMVVVNNSLAGLVFNEFDDKVAIEEYEAAAILAMGQTPNDDVKEWA
LKGQSRTLTKILQFSDAIRQVTGAQEVGSEHVLFAILLNPDVMAARLLEMAGFKLRDEGQGDLKISDLRKAIERQAAYSK
EIIKAIYELRKPKKSKAGGTFSDMMKPASSAGELSDFTRDLTQMASQGLLEPVIGRDKEITRMVQVLSRKTKNNPVLVGD
AGVGKTALAYGLAQRIVEGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIIDDIEADGKIILFVDELHTIMGSGS
GIDSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKILIEEPSLEDAYKILLGLKSSYEMYHNVSISD
QAVKVAVKVAHRYLTSKNLPDSAIDLLDEASATVQGLIKKETPSFLSPIDQAILDGNFKKVASLLKAGQKTKPNPTPVTE
DDIMATLSKLSGIPLEKISQADSQKYLRLEEELHKRVIGQDEAISAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAEVLFDDESALIRFDMSEYMEKFSASRLNGAPPGYVGYDEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFTNTIIIMTSNLGATALRDDKTVGFGARDISQDHQAMEKRILEELKKAYRPEFINRIDEKVVFHS
LTQDDMQQVVRIMVKPLVAALEEKGIALKFQPSALKYLSEKGYDIEMGARPLRRTIQTEVEDKLSELLLSGQLASGNKLK
VGLTKGKIKCDIE
Nucleotide
Download Length: 2442 bp
>NTDB_id=1128064 FGL20_RS09190 WP_093959022.1 1856388..1858829(-) (clpC) [Streptococcus porcinus strain NCTC10925]
ATGATAGATTATTCACTTAAAATGCAGGAAATTTTCAAGCAGGCTCAATATCAAGCGGCACGCTTTGATAGCCAATATTT
AGAAACATGGCATCTTCTTTTAGCAATGGTTGTGGTTAACAATTCACTCGCTGGACTTGTCTTCAATGAATTTGATGATA
AAGTTGCTATAGAAGAATATGAAGCAGCAGCTATTTTGGCTATGGGACAAACGCCAAATGATGATGTGAAAGAATGGGCT
TTAAAAGGTCAGTCTAGAACTTTAACAAAAATTCTCCAGTTTTCAGATGCTATCCGTCAAGTAACGGGTGCCCAGGAAGT
GGGATCAGAACACGTGCTTTTTGCAATATTGTTGAACCCTGATGTGATGGCAGCACGTTTGCTTGAAATGGCTGGTTTTA
AACTAAGAGATGAGGGACAAGGGGACTTGAAAATCTCTGATTTACGTAAAGCAATTGAAAGACAGGCTGCCTATAGCAAA
GAGATTATTAAAGCTATTTATGAATTACGCAAACCTAAAAAATCAAAAGCGGGTGGGACATTCTCAGATATGATGAAACC
GGCAAGTTCAGCAGGTGAACTTTCTGATTTCACACGTGATTTAACGCAAATGGCCAGTCAAGGACTTTTAGAACCGGTGA
TTGGTCGAGATAAAGAAATTACCCGAATGGTTCAGGTATTGAGCCGCAAGACTAAGAATAATCCGGTCTTAGTTGGAGAT
GCGGGTGTTGGGAAAACGGCTTTGGCATATGGACTAGCTCAACGAATTGTCGAGGGGGCTATTCCCTACGAATTGCAGGA
TATGCGAGTTTTGGAATTGGACATGATGAGTGTGGTTGCAGGAACTCGTTTTCGTGGAGATTTTGAAGAGCGAATGAATC
AAATCATAGATGATATTGAAGCTGATGGGAAAATCATTCTTTTTGTTGATGAGTTACATACGATTATGGGTTCAGGAAGT
GGTATTGATAGTACCTTAGATGCGGCTAACATTTTGAAACCAGCCTTGTCTCGCGGAACGCTACATATGGTAGGTGCAAC
AACTCAGGAAGAATATCAAAAACATATTGAAAAAGATGCAGCTCTATCTCGTCGTTTTGCTAAAATTTTAATTGAAGAAC
CAAGCCTTGAAGATGCTTACAAAATTCTTCTTGGTCTAAAATCTTCTTATGAGATGTATCATAATGTTAGTATTTCTGAT
CAGGCTGTCAAAGTGGCTGTTAAAGTTGCACATCGTTATTTAACTAGTAAAAACCTGCCAGATTCTGCTATAGACCTCTT
AGATGAGGCAAGTGCAACTGTCCAGGGACTAATAAAAAAAGAGACCCCATCCTTTTTAAGCCCTATTGATCAAGCTATCC
TAGATGGGAATTTTAAAAAAGTGGCTAGTTTGTTAAAAGCCGGTCAGAAAACAAAGCCCAATCCAACCCCAGTTACAGAA
GATGATATTATGGCAACTTTGAGTAAACTATCAGGGATACCGCTAGAGAAAATTAGTCAAGCTGATAGCCAAAAATACCT
TCGTTTAGAGGAAGAATTACACAAACGCGTTATTGGTCAAGACGAAGCTATTTCAGCTATTTCAAGGGCTATACGTCGTA
ATCAATCTGGTATTCGAACTGGCAAACGCCCAATCGGTTCATTTATGTTTCTAGGTCCAACAGGTGTTGGGAAAACAGAG
CTGGCTAAAGCCTTGGCTGAGGTTTTATTTGATGATGAATCAGCATTAATTCGTTTTGATATGTCAGAGTACATGGAAAA
ATTTTCAGCCAGTCGTCTTAATGGTGCCCCTCCAGGATATGTGGGCTATGACGAGGGTGGAGAATTGACAGAAAAAGTAA
GAAATAGACCTTACTCCGTTTTGCTCTTTGATGAAGTTGAAAAAGCTCATCCAGATATTTTCAACGTTCTTCTTCAAGTT
TTGGATGATGGGGTGCTGACAGATTCTCGCGGTCGCAAAGTTGACTTCACGAATACTATTATTATCATGACTAGCAATTT
AGGTGCAACAGCACTTCGAGATGATAAGACTGTAGGTTTTGGTGCTCGAGATATTAGCCAAGATCACCAAGCTATGGAAA
AACGTATTTTAGAAGAACTAAAGAAAGCTTATCGTCCTGAATTTATTAATCGAATTGATGAAAAGGTTGTTTTCCACAGT
TTAACTCAAGATGATATGCAACAAGTAGTGAGGATTATGGTGAAACCGTTAGTTGCTGCCTTAGAAGAAAAGGGAATTGC
TCTAAAATTCCAGCCGTCAGCACTTAAATACCTATCTGAAAAAGGTTATGATATTGAAATGGGAGCTCGTCCTCTTCGAA
GAACGATTCAAACAGAAGTTGAGGATAAATTGTCAGAGTTACTCCTTTCGGGACAGTTAGCTTCTGGAAATAAATTAAAA
GTTGGTTTAACTAAAGGTAAAATAAAATGTGACATAGAATAA
ATGATAGATTATTCACTTAAAATGCAGGAAATTTTCAAGCAGGCTCAATATCAAGCGGCACGCTTTGATAGCCAATATTT
AGAAACATGGCATCTTCTTTTAGCAATGGTTGTGGTTAACAATTCACTCGCTGGACTTGTCTTCAATGAATTTGATGATA
AAGTTGCTATAGAAGAATATGAAGCAGCAGCTATTTTGGCTATGGGACAAACGCCAAATGATGATGTGAAAGAATGGGCT
TTAAAAGGTCAGTCTAGAACTTTAACAAAAATTCTCCAGTTTTCAGATGCTATCCGTCAAGTAACGGGTGCCCAGGAAGT
GGGATCAGAACACGTGCTTTTTGCAATATTGTTGAACCCTGATGTGATGGCAGCACGTTTGCTTGAAATGGCTGGTTTTA
AACTAAGAGATGAGGGACAAGGGGACTTGAAAATCTCTGATTTACGTAAAGCAATTGAAAGACAGGCTGCCTATAGCAAA
GAGATTATTAAAGCTATTTATGAATTACGCAAACCTAAAAAATCAAAAGCGGGTGGGACATTCTCAGATATGATGAAACC
GGCAAGTTCAGCAGGTGAACTTTCTGATTTCACACGTGATTTAACGCAAATGGCCAGTCAAGGACTTTTAGAACCGGTGA
TTGGTCGAGATAAAGAAATTACCCGAATGGTTCAGGTATTGAGCCGCAAGACTAAGAATAATCCGGTCTTAGTTGGAGAT
GCGGGTGTTGGGAAAACGGCTTTGGCATATGGACTAGCTCAACGAATTGTCGAGGGGGCTATTCCCTACGAATTGCAGGA
TATGCGAGTTTTGGAATTGGACATGATGAGTGTGGTTGCAGGAACTCGTTTTCGTGGAGATTTTGAAGAGCGAATGAATC
AAATCATAGATGATATTGAAGCTGATGGGAAAATCATTCTTTTTGTTGATGAGTTACATACGATTATGGGTTCAGGAAGT
GGTATTGATAGTACCTTAGATGCGGCTAACATTTTGAAACCAGCCTTGTCTCGCGGAACGCTACATATGGTAGGTGCAAC
AACTCAGGAAGAATATCAAAAACATATTGAAAAAGATGCAGCTCTATCTCGTCGTTTTGCTAAAATTTTAATTGAAGAAC
CAAGCCTTGAAGATGCTTACAAAATTCTTCTTGGTCTAAAATCTTCTTATGAGATGTATCATAATGTTAGTATTTCTGAT
CAGGCTGTCAAAGTGGCTGTTAAAGTTGCACATCGTTATTTAACTAGTAAAAACCTGCCAGATTCTGCTATAGACCTCTT
AGATGAGGCAAGTGCAACTGTCCAGGGACTAATAAAAAAAGAGACCCCATCCTTTTTAAGCCCTATTGATCAAGCTATCC
TAGATGGGAATTTTAAAAAAGTGGCTAGTTTGTTAAAAGCCGGTCAGAAAACAAAGCCCAATCCAACCCCAGTTACAGAA
GATGATATTATGGCAACTTTGAGTAAACTATCAGGGATACCGCTAGAGAAAATTAGTCAAGCTGATAGCCAAAAATACCT
TCGTTTAGAGGAAGAATTACACAAACGCGTTATTGGTCAAGACGAAGCTATTTCAGCTATTTCAAGGGCTATACGTCGTA
ATCAATCTGGTATTCGAACTGGCAAACGCCCAATCGGTTCATTTATGTTTCTAGGTCCAACAGGTGTTGGGAAAACAGAG
CTGGCTAAAGCCTTGGCTGAGGTTTTATTTGATGATGAATCAGCATTAATTCGTTTTGATATGTCAGAGTACATGGAAAA
ATTTTCAGCCAGTCGTCTTAATGGTGCCCCTCCAGGATATGTGGGCTATGACGAGGGTGGAGAATTGACAGAAAAAGTAA
GAAATAGACCTTACTCCGTTTTGCTCTTTGATGAAGTTGAAAAAGCTCATCCAGATATTTTCAACGTTCTTCTTCAAGTT
TTGGATGATGGGGTGCTGACAGATTCTCGCGGTCGCAAAGTTGACTTCACGAATACTATTATTATCATGACTAGCAATTT
AGGTGCAACAGCACTTCGAGATGATAAGACTGTAGGTTTTGGTGCTCGAGATATTAGCCAAGATCACCAAGCTATGGAAA
AACGTATTTTAGAAGAACTAAAGAAAGCTTATCGTCCTGAATTTATTAATCGAATTGATGAAAAGGTTGTTTTCCACAGT
TTAACTCAAGATGATATGCAACAAGTAGTGAGGATTATGGTGAAACCGTTAGTTGCTGCCTTAGAAGAAAAGGGAATTGC
TCTAAAATTCCAGCCGTCAGCACTTAAATACCTATCTGAAAAAGGTTATGATATTGAAATGGGAGCTCGTCCTCTTCGAA
GAACGATTCAAACAGAAGTTGAGGATAAATTGTCAGAGTTACTCCTTTCGGGACAGTTAGCTTCTGGAAATAAATTAAAA
GTTGGTTTAACTAAAGGTAAAATAAAATGTGACATAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
73.801 |
100 |
0.738 |
| clpC | Streptococcus thermophilus LMD-9 |
72.604 |
100 |
0.727 |
| clpC | Streptococcus thermophilus LMG 18311 |
72.604 |
100 |
0.727 |
| clpC | Streptococcus pneumoniae TIGR4 |
65.437 |
100 |
0.654 |
| clpC | Streptococcus pneumoniae Rx1 |
65.437 |
100 |
0.654 |
| clpC | Streptococcus pneumoniae D39 |
65.437 |
100 |
0.654 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.904 |
100 |
0.492 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.471 |
100 |
0.46 |
| clpE | Streptococcus pneumoniae Rx1 |
45.666 |
79.459 |
0.363 |
| clpE | Streptococcus pneumoniae D39 |
45.666 |
79.459 |
0.363 |
| clpE | Streptococcus pneumoniae R6 |
45.666 |
79.459 |
0.363 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.666 |
79.459 |
0.363 |