Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FGL20_RS07900 Genome accession   NZ_LR594050
Coordinates   1596146..1596871 (-) Length   241 a.a.
NCBI ID   WP_003085185.1    Uniprot ID   A0A4V0HDU1
Organism   Streptococcus porcinus strain NCTC10925     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1591146..1601871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL20_RS07865 (NCTC10925_01584) rnpM 1591322..1591618 (-) 297 WP_003084094.1 RNase P modulator RnpM -
  FGL20_RS07870 (NCTC10925_01585) nusA 1591634..1592788 (-) 1155 WP_003084329.1 transcription termination factor NusA -
  FGL20_RS07875 (NCTC10925_01586) rimP 1592850..1593347 (-) 498 WP_167394855.1 ribosome maturation factor RimP -
  FGL20_RS07885 (NCTC10925_01588) trmB 1593622..1594257 (-) 636 WP_093958970.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGL20_RS07890 (NCTC10925_01589) ccrZ 1594257..1595048 (-) 792 WP_003084957.1 cell cycle regulator CcrZ -
  FGL20_RS07895 (NCTC10925_01590) - 1595109..1596143 (-) 1035 WP_093958971.1 ABC transporter permease -
  FGL20_RS07900 (NCTC10925_01591) pptA 1596146..1596871 (-) 726 WP_003085185.1 ABC transporter ATP-binding protein Regulator
  FGL20_RS07905 (NCTC10925_01592) - 1597307..1597726 (+) 420 WP_003082804.1 HIT family protein -
  FGL20_RS07910 (NCTC10925_01593) - 1597723..1598007 (+) 285 WP_003084563.1 hypothetical protein -
  FGL20_RS07915 (NCTC10925_01594) brpA 1598080..1599375 (-) 1296 WP_093958972.1 biofilm formation/cell division transcriptional regulator BrpA -
  FGL20_RS07920 (NCTC10925_01595) - 1599383..1599907 (-) 525 WP_003085921.1 GNAT family N-acetyltransferase -
  FGL20_RS07925 (NCTC10925_01596) tsaE 1599900..1600343 (-) 444 WP_003083787.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26688.02 Da        Isoelectric Point: 4.5971

>NTDB_id=1128057 FGL20_RS07900 WP_003085185.1 1596146..1596871(-) (pptA) [Streptococcus porcinus strain NCTC10925]
MLKIENLTGGYINIPVLKDITFSVDDGQLVGLIGLNGAGKSTTIKEIIGLLRPYKGTIKIDGLSLEEDPAAYRKKIGFIP
ETPSLYEELTLAEHIETIAMAYDIEVSDAFERAQPLLKTYRLLDRLDWYPSQFSKGMKQKVMIICAFIIDPSLFILDEPF
LGLDPLAISDLIAYLEVEKGKGKSILMSTHVLDSAEKMCDSFVILHQGEIRAQGTLSDLRATFGNPKASLNDIYLALTTE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1128057 FGL20_RS07900 WP_003085185.1 1596146..1596871(-) (pptA) [Streptococcus porcinus strain NCTC10925]
ATGCTGAAAATCGAAAATTTAACAGGGGGATATATTAATATTCCTGTTCTGAAAGATATTACTTTCTCAGTTGATGACGG
CCAGTTAGTAGGTTTAATAGGTTTAAATGGCGCTGGGAAATCAACTACTATTAAGGAAATTATCGGACTTTTAAGACCTT
ATAAGGGCACAATAAAAATTGATGGGCTAAGCTTGGAAGAAGACCCAGCTGCTTATCGTAAAAAAATTGGATTTATTCCA
GAAACACCAAGTTTATATGAAGAATTGACTTTGGCAGAACATATTGAAACGATAGCTATGGCTTATGATATAGAGGTTTC
AGACGCTTTTGAACGTGCACAGCCTCTACTTAAAACTTATCGTTTGTTAGACCGATTAGATTGGTATCCAAGCCAGTTTT
CAAAAGGAATGAAACAAAAGGTAATGATTATTTGTGCTTTTATTATTGATCCTAGTCTCTTCATTTTAGATGAACCTTTC
TTGGGACTTGATCCTTTAGCTATCTCGGATTTAATTGCTTATTTAGAAGTTGAAAAAGGAAAAGGGAAGTCTATTTTAAT
GAGCACTCATGTCCTTGATTCAGCAGAAAAAATGTGTGATTCTTTTGTAATTCTACACCAGGGAGAGATAAGAGCTCAAG
GAACTCTATCTGATTTACGAGCAACTTTTGGAAATCCAAAAGCCAGTTTGAATGATATCTATTTAGCGTTAACAACTGAG
GTATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4V0HDU1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.109

98.755

0.722
  pptA Streptococcus thermophilus LMD-9

73.109

98.755

0.722

Multiple sequence alignment