Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | FGL23_RS09950 | Genome accession | NZ_LR594049 |
| Coordinates | 2049830..2052259 (-) | Length | 809 a.a. |
| NCBI ID | WP_061603811.1 | Uniprot ID | - |
| Organism | Streptococcus gordonii strain NCTC10231 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2044830..2057259
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL23_RS09925 (NCTC10231_01986) | dusB | 2044957..2045934 (+) | 978 | WP_045634802.1 | tRNA dihydrouridine synthase DusB | - |
| FGL23_RS09930 (NCTC10231_01987) | - | 2045974..2046723 (-) | 750 | WP_081106378.1 | DUF6287 domain-containing protein | - |
| FGL23_RS09935 (NCTC10231_01988) | - | 2046884..2047672 (-) | 789 | WP_061603808.1 | NUDIX domain-containing protein | - |
| FGL23_RS09940 (NCTC10231_01989) | pnuC | 2047716..2048531 (-) | 816 | WP_061603809.1 | nicotinamide riboside transporter PnuC | - |
| FGL23_RS09945 (NCTC10231_01990) | - | 2048553..2049611 (-) | 1059 | WP_061603810.1 | AAA family ATPase | - |
| FGL23_RS09950 (NCTC10231_01991) | clpC | 2049830..2052259 (-) | 2430 | WP_061603811.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| FGL23_RS09955 (NCTC10231_01992) | - | 2052266..2052724 (-) | 459 | WP_061603812.1 | CtsR family transcriptional regulator | - |
| FGL23_RS09960 (NCTC10231_01993) | - | 2053044..2053394 (+) | 351 | WP_041789810.1 | hypothetical protein | - |
| FGL23_RS09965 (NCTC10231_01994) | tsf | 2053502..2054545 (-) | 1044 | WP_061597769.1 | translation elongation factor Ts | - |
| FGL23_RS09970 (NCTC10231_01995) | rpsB | 2054625..2055407 (-) | 783 | WP_008809924.1 | 30S ribosomal protein S2 | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 90177.03 Da Isoelectric Point: 6.5943
>NTDB_id=1128005 FGL23_RS09950 WP_061603811.1 2049830..2052259(-) (clpC) [Streptococcus gordonii strain NCTC10231]
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGQFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGLLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHKVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLSRLIEKENQPLLSNLRVEETDIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMIKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIV
MKYSKALIVSIEEAQQLASHFESEYLESWHLLIAFSNYPYSVAGSVLNDYPLEIDHFEDAAYHVVGKSYQKEGQFSILPF
SHRLTTLFKEAKAIAEATHAKEVGTEHILYAIISDRGTLATRILEFVGFSYEDKEGLLRINDLRRNLEQKSGWTKNDLKA
IRSLHKGFNQAKQNMANMMGMPPTQSGGLEDYTRDLTELARSGQLEPVVGRDQEISRMIQVLSRKTKNNPVLVGDAGVGK
TALALGLAQRVASGQVPHELAKMRVLELDLMNVVAGTRFRGDFEERMNNIIDDIEKDGKVILFIDELHTIMGSGSGIDST
MDAANILKPALARGTLRTIGATTQEEYQKHIEKDAALSRRFAKISIEEPSVADSIAILKGLKENYEAHHKVTITDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVRNNGPQSHAQEDLSPADRAIIAGQFNKLSRLIEKENQPLLSNLRVEETDIL
TTLSRLSGIPVQKLTQTDAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGSFMFLGPTGVGKTELAKA
LAETLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAD
HMQEVVKVMIKPLVASLAEKNIQLKFQASALKLLAKEGYDVEMGARPLRRTLQTKVEDKLAELLLTGDLQAGQTLKVGVK
AGQLKFDIV
Nucleotide
Download Length: 2430 bp
>NTDB_id=1128005 FGL23_RS09950 WP_061603811.1 2049830..2052259(-) (clpC) [Streptococcus gordonii strain NCTC10231]
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGCCATTTTGAATCTGAATATTTAGA
GTCATGGCATCTATTGATTGCTTTTTCTAATTATCCTTATAGCGTAGCTGGCTCGGTTTTAAATGATTATCCACTGGAAA
TCGATCATTTTGAGGATGCTGCTTACCATGTGGTAGGAAAGTCTTATCAGAAGGAAGGACAATTTAGTATCCTACCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
TATCTTATACGCTATCATCAGCGATAGAGGTACCCTAGCAACTCGTATTTTGGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGACTCTTGCGTATTAATGATTTGCGGAGAAATCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCC
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGCTTAGAGGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTAGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGCGATGCTGGAGTTGGTAAA
ACTGCTCTTGCTCTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCACACGAACTAGCCAAAATGCGGGTTTTAGA
GCTTGATTTAATGAATGTAGTCGCAGGGACTCGTTTCCGTGGAGATTTTGAAGAGCGTATGAACAATATCATTGATGATA
TTGAGAAAGATGGTAAGGTCATCCTCTTTATCGATGAGCTTCATACGATTATGGGATCTGGTAGTGGTATTGATTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGGCGCTTTGCTAAGATCAGTATTGAAGAACCAAGTGTGGCTGACA
GCATTGCTATCCTGAAGGGGCTAAAAGAAAACTATGAAGCCCATCATAAGGTAACGATTACAGATCAAGCCATTGAAACA
GCAGTAAAATATGCCCACCGTTATTTGACAAGTAAGCATCTGCCAGATTCAGCAATTGATCTGTTAGATGAAGCGAGTGC
TACAGTACGTAACAATGGTCCTCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAACTTAGTCGCTTGATCGAGAAAGAAAATCAACCTCTGTTAAGTAATTTAAGAGTAGAGGAAACAGATATTCTG
ACAACCCTCAGTCGCCTGTCAGGTATTCCAGTTCAAAAATTGACCCAGACAGATGCTAAGAAGTATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGTCAAGATGAAGCTATCTCAGCTATTAGTCGTGCAATCCGTCGTAACCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGACCAACTGGAGTTGGTAAGACTGAGTTAGCTAAGGCT
TTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATATATGGAGAAGTTTGCTGCTAG
CCGTCTCAATGGAGCGCCTCCAGGCTACGTCGGCTATGAAGAAGGAGGCGAATTAACAGAGAAAGTTCGCAATCGACCAT
ATTCCGTCCTCTTATTTGATGAAGTGGAAAAAGCTCATCCGGATATTTTCAATGTCCTTCTGCAGGTTCTAGATGATGGT
GTATTGACTGATAGTAAGGGAAGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGTAACCTAGGCGCGACCAG
TCTGCGGGATGATAAGACAGTTGGCTTTGGGGCTCGTGACATCCGTTTAGACCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTTAAAAAGGCTTACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCTGCTGAC
CATATGCAGGAGGTTGTCAAAGTGATGATTAAGCCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAACTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGCTATGATGTAGAAATGGGAGCAAGACCTCTTCGTAGAACTCTGCAAA
CCAAAGTTGAAGATAAATTAGCAGAACTGCTATTGACAGGTGATTTACAAGCAGGCCAGACCTTGAAGGTGGGTGTTAAG
GCAGGCCAGTTGAAGTTTGATATAGTATAA
ATGAAATATTCAAAAGCCTTGATTGTTAGTATAGAAGAAGCCCAGCAACTGGCTAGCCATTTTGAATCTGAATATTTAGA
GTCATGGCATCTATTGATTGCTTTTTCTAATTATCCTTATAGCGTAGCTGGCTCGGTTTTAAATGATTATCCACTGGAAA
TCGATCATTTTGAGGATGCTGCTTACCATGTGGTAGGAAAGTCTTATCAGAAGGAAGGACAATTTAGTATCCTACCTTTT
TCTCATCGCTTGACGACTCTTTTTAAGGAGGCAAAAGCTATAGCCGAAGCTACTCACGCAAAGGAAGTCGGAACTGAACA
TATCTTATACGCTATCATCAGCGATAGAGGTACCCTAGCAACTCGTATTTTGGAATTTGTCGGCTTTAGTTATGAAGACA
AAGAAGGACTCTTGCGTATTAATGATTTGCGGAGAAATCTGGAACAAAAGTCTGGCTGGACTAAGAATGATTTAAAAGCC
ATCCGCAGTCTTCATAAAGGTTTTAATCAAGCCAAGCAAAACATGGCAAACATGATGGGGATGCCACCTACTCAGAGTGG
TGGCTTAGAGGATTACACACGAGACTTGACGGAATTAGCTCGTTCAGGTCAGCTAGAGCCTGTTGTTGGTCGAGATCAGG
AAATCTCTCGGATGATTCAGGTTCTCAGTCGCAAGACGAAGAATAACCCTGTCTTGGTTGGCGATGCTGGAGTTGGTAAA
ACTGCTCTTGCTCTCGGTTTGGCCCAGCGTGTAGCTTCTGGTCAAGTTCCACACGAACTAGCCAAAATGCGGGTTTTAGA
GCTTGATTTAATGAATGTAGTCGCAGGGACTCGTTTCCGTGGAGATTTTGAAGAGCGTATGAACAATATCATTGATGATA
TTGAGAAAGATGGTAAGGTCATCCTCTTTATCGATGAGCTTCATACGATTATGGGATCTGGTAGTGGTATTGATTCTACG
ATGGATGCTGCGAATATCCTTAAACCTGCTCTGGCTCGCGGAACACTGCGTACGATAGGAGCTACAACTCAAGAAGAATA
CCAAAAGCATATTGAAAAAGACGCTGCTCTATCTCGGCGCTTTGCTAAGATCAGTATTGAAGAACCAAGTGTGGCTGACA
GCATTGCTATCCTGAAGGGGCTAAAAGAAAACTATGAAGCCCATCATAAGGTAACGATTACAGATCAAGCCATTGAAACA
GCAGTAAAATATGCCCACCGTTATTTGACAAGTAAGCATCTGCCAGATTCAGCAATTGATCTGTTAGATGAAGCGAGTGC
TACAGTACGTAACAATGGTCCTCAGAGTCATGCACAAGAGGATTTGAGTCCAGCAGATCGAGCAATTATAGCTGGTCAGT
TCAATAAACTTAGTCGCTTGATCGAGAAAGAAAATCAACCTCTGTTAAGTAATTTAAGAGTAGAGGAAACAGATATTCTG
ACAACCCTCAGTCGCCTGTCAGGTATTCCAGTTCAAAAATTGACCCAGACAGATGCTAAGAAGTATTTGCACTTAGAAGA
AGAATTGCATAAGCGGGTGATTGGTCAAGATGAAGCTATCTCAGCTATTAGTCGTGCAATCCGTCGTAACCAGTCAGGTA
TTCGAGCGAATAAGCGACCGATTGGTTCCTTTATGTTCTTGGGACCAACTGGAGTTGGTAAGACTGAGTTAGCTAAGGCT
TTGGCAGAAACCCTCTTTGACGACGAATCAGCTCTCATTCGTTTTGATATGAGTGAATATATGGAGAAGTTTGCTGCTAG
CCGTCTCAATGGAGCGCCTCCAGGCTACGTCGGCTATGAAGAAGGAGGCGAATTAACAGAGAAAGTTCGCAATCGACCAT
ATTCCGTCCTCTTATTTGATGAAGTGGAAAAAGCTCATCCGGATATTTTCAATGTCCTTCTGCAGGTTCTAGATGATGGT
GTATTGACTGATAGTAAGGGAAGAAAGATTGATTTTTCAAATACGATTATTATCATGACCAGTAACCTAGGCGCGACCAG
TCTGCGGGATGATAAGACAGTTGGCTTTGGGGCTCGTGACATCCGTTTAGACCATGCAAATATGGAAAAACGAATGTTAG
AAGAGCTTAAAAAGGCTTACCGTCCAGAATTTATTAACCGGATTGATGAAAAAGTCGTCTTCCATAGCTTGTCTGCTGAC
CATATGCAGGAGGTTGTCAAAGTGATGATTAAGCCTCTGGTTGCCAGTCTAGCTGAAAAGAATATCCAACTAAAATTCCA
AGCTAGTGCCTTGAAACTACTAGCTAAAGAAGGCTATGATGTAGAAATGGGAGCAAGACCTCTTCGTAGAACTCTGCAAA
CCAAAGTTGAAGATAAATTAGCAGAACTGCTATTGACAGGTGATTTACAAGCAGGCCAGACCTTGAAGGTGGGTGTTAAG
GCAGGCCAGTTGAAGTTTGATATAGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
78.272 |
100 |
0.784 |
| clpC | Streptococcus pneumoniae Rx1 |
78.272 |
100 |
0.784 |
| clpC | Streptococcus pneumoniae D39 |
78.272 |
100 |
0.784 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.422 |
100 |
0.672 |
| clpC | Streptococcus mutans UA159 |
67.79 |
99.011 |
0.671 |
| clpC | Streptococcus thermophilus LMD-9 |
66.3 |
100 |
0.671 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.282 |
100 |
0.509 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.192 |
100 |
0.465 |
| clpE | Streptococcus mutans UA159 |
47.91 |
76.885 |
0.368 |
| clpE | Streptococcus pneumoniae Rx1 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
46.13 |
79.852 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.13 |
79.852 |
0.368 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.613 |
81.459 |
0.363 |