Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FGL23_RS08650 Genome accession   NZ_LR594049
Coordinates   1801016..1802782 (-) Length   588 a.a.
NCBI ID   WP_045504223.1    Uniprot ID   -
Organism   Streptococcus gordonii strain NCTC10231     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1796016..1807782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL23_RS08635 (NCTC10231_01723) - 1796113..1797726 (-) 1614 WP_061585716.1 CTP synthase -
  FGL23_RS08640 (NCTC10231_01724) manA 1798165..1799109 (-) 945 WP_012130786.1 mannose-6-phosphate isomerase, class I -
  FGL23_RS08645 (NCTC10231_01725) rcrQ 1799269..1801026 (-) 1758 WP_061603332.1 ABC transporter ATP-binding protein Regulator
  FGL23_RS08650 (NCTC10231_01726) rcrP 1801016..1802782 (-) 1767 WP_045504223.1 ABC transporter ATP-binding protein Regulator
  FGL23_RS08655 (NCTC10231_01727) - 1802775..1803233 (-) 459 WP_012130789.1 MarR family winged helix-turn-helix transcriptional regulator -
  FGL23_RS08660 (NCTC10231_01728) - 1803506..1804075 (-) 570 WP_060553896.1 hypothetical protein -
  FGL23_RS08665 (NCTC10231_01729) - 1804085..1804495 (-) 411 WP_060553895.1 peptide deformylase -
  FGL23_RS08670 (NCTC10231_01730) scrK 1804544..1805443 (-) 900 WP_045773521.1 fructokinase ScrK -
  FGL23_RS08675 (NCTC10231_01731) - 1805685..1806215 (-) 531 WP_061603453.1 hypothetical protein -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 64916.24 Da        Isoelectric Point: 5.6462

>NTDB_id=1127989 FGL23_RS08650 WP_045504223.1 1801016..1802782(-) (rcrP) [Streptococcus gordonii strain NCTC10231]
MFKLFKRLTSKEIGLILMTVVFICLTVYLELEVPTYMSEITTLLQTPGTTTGDLWVPGLKMLGLSFASLFSLVIAGFVSS
RMASSYTTRLREDIFNRVLDYSNSEIKKFSIPSLLTRTTNDITQIQVFIAMGLQVVIRGSIMAIWAMTKVVGKSDAWLIA
VLVAVAAIILMTIVLVTLAFPKQSIVQTLTDKLNSVTRESLTGIRVVRAYNAEDYQDAKFGAANDEVTSLNIFINRFMSL
FNPIMSGISSGLTLAIYWIGAYLIHSAASADKLGLFSDMVVFMSYGMQVVIGFLLMGALFIVLPRTLVSAGRINKVLALD
SSIKEKDQAKTEGQSKGQVTFEDVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLVNLIPRFYDVSEGRILVD
GIDVRDYELKALRNKVGYIPQKAVLFSGTIASNLDFGESMETPLDEEKMWEALELAQAKSFVEEKEAGLESEVSQGGTNY
SGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRKELAEQTQHMTKLIVAQRISTIMDADQILVLDNGKVVGQGT
HKELLTTNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=1127989 FGL23_RS08650 WP_045504223.1 1801016..1802782(-) (rcrP) [Streptococcus gordonii strain NCTC10231]
ATGTTTAAATTATTTAAACGCTTGACGTCAAAAGAAATCGGCCTGATTTTGATGACAGTTGTTTTTATCTGTCTGACCGT
TTATCTAGAGTTGGAAGTGCCAACTTATATGTCGGAAATTACAACCTTACTACAGACACCGGGGACAACGACAGGAGATC
TATGGGTGCCAGGTTTGAAAATGCTAGGCCTATCCTTTGCCAGCTTATTCTCCTTGGTAATAGCTGGTTTTGTGTCCTCT
CGGATGGCTTCTAGCTATACTACCCGCTTGCGTGAGGATATTTTTAATCGTGTCTTGGATTATTCTAATTCAGAGATTAA
AAAATTCTCTATCCCAAGTCTTCTGACCAGAACAACCAACGATATTACCCAAATTCAGGTGTTTATCGCTATGGGACTAC
AAGTTGTTATTCGAGGAAGCATCATGGCGATTTGGGCTATGACGAAGGTTGTTGGCAAATCAGATGCTTGGTTGATCGCT
GTTTTAGTCGCGGTTGCGGCCATTATATTAATGACGATTGTCTTAGTGACTTTGGCTTTTCCAAAGCAATCTATTGTACA
AACCTTGACAGATAAATTAAATAGTGTGACACGTGAGAGTTTGACAGGGATTCGGGTTGTTCGGGCCTATAATGCAGAAG
ATTACCAGGATGCAAAATTTGGTGCAGCAAACGACGAGGTAACTAGCCTTAATATTTTTATTAACCGCTTCATGTCTTTG
TTCAATCCGATTATGAGCGGAATTTCAAGTGGTTTAACGCTGGCTATTTATTGGATTGGAGCTTATTTGATTCATAGCGC
AGCATCTGCTGATAAGCTTGGTCTATTCAGTGATATGGTTGTTTTCATGTCTTATGGTATGCAGGTTGTAATTGGCTTCT
TGCTGATGGGGGCTTTATTTATTGTTTTACCACGTACCCTTGTTTCGGCAGGACGGATTAACAAAGTGTTAGCACTGGAT
AGCAGTATCAAAGAAAAAGATCAAGCAAAGACTGAAGGCCAAAGCAAAGGTCAAGTAACTTTTGAAGATGTTTCTTTCCG
TTATGCCAAAAATTCTGAGGCAGTCATTGAGCATGTTAGCTTTACGGCTAAAGCTGGTGAAACAGTTGCCTTTATTGGAT
CTACTGGTTCAGGTAAATCAACCCTTGTCAATTTGATACCTCGTTTCTATGATGTGTCAGAAGGTAGGATTCTAGTCGAT
GGTATAGATGTCCGTGACTACGAGCTTAAAGCTCTACGTAATAAGGTAGGATATATTCCGCAGAAAGCTGTACTTTTCTC
AGGAACAATTGCTTCAAATTTGGACTTTGGAGAAAGCATGGAAACTCCACTAGATGAAGAGAAAATGTGGGAAGCCCTTG
AACTAGCACAAGCCAAATCATTTGTAGAAGAAAAAGAGGCAGGGCTTGAGTCTGAAGTGTCTCAAGGAGGCACCAACTAT
TCTGGTGGTCAACGCCAACGTCTGGCTATTGCGCGTGCATTGGCCCGTAAGCCGGAAATTTTAATATTTGATGATTCTTT
CTCTGCTTTGGACTATAAGACAGATCGTATTTTACGAAAAGAATTGGCAGAACAGACCCAACATATGACAAAGCTGATTG
TCGCTCAACGAATCTCCACTATTATGGATGCCGATCAAATCCTAGTTCTAGACAATGGTAAAGTCGTTGGACAAGGTACC
CATAAAGAGTTGTTGACTACGAATGAAGTGTACCAAGAAATTGCTTATTCTCAATTATCAAAGGAGGAACTAGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(54-285)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

69.167

100

0.706

Multiple sequence alignment