Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FGL23_RS08645 Genome accession   NZ_LR594049
Coordinates   1799269..1801026 (-) Length   585 a.a.
NCBI ID   WP_061603332.1    Uniprot ID   -
Organism   Streptococcus gordonii strain NCTC10231     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1794269..1806026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL23_RS08620 (NCTC10231_01720) - 1794345..1795226 (-) 882 WP_045634061.1 class II fructose-bisphosphate aldolase -
  FGL23_RS08630 (NCTC10231_01722) - 1795632..1796042 (-) 411 WP_061585715.1 GyrI-like domain-containing protein -
  FGL23_RS08635 (NCTC10231_01723) - 1796113..1797726 (-) 1614 WP_061585716.1 CTP synthase -
  FGL23_RS08640 (NCTC10231_01724) manA 1798165..1799109 (-) 945 WP_012130786.1 mannose-6-phosphate isomerase, class I -
  FGL23_RS08645 (NCTC10231_01725) rcrQ 1799269..1801026 (-) 1758 WP_061603332.1 ABC transporter ATP-binding protein Regulator
  FGL23_RS08650 (NCTC10231_01726) rcrP 1801016..1802782 (-) 1767 WP_045504223.1 ABC transporter ATP-binding protein Regulator
  FGL23_RS08655 (NCTC10231_01727) - 1802775..1803233 (-) 459 WP_012130789.1 MarR family winged helix-turn-helix transcriptional regulator -
  FGL23_RS08660 (NCTC10231_01728) - 1803506..1804075 (-) 570 WP_060553896.1 hypothetical protein -
  FGL23_RS08665 (NCTC10231_01729) - 1804085..1804495 (-) 411 WP_060553895.1 peptide deformylase -
  FGL23_RS08670 (NCTC10231_01730) scrK 1804544..1805443 (-) 900 WP_045773521.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64802.76 Da        Isoelectric Point: 5.0959

>NTDB_id=1127988 FGL23_RS08645 WP_061603332.1 1799269..1801026(-) (rcrQ) [Streptococcus gordonii strain NCTC10231]
MENKKTPLFTQMKPYIKGFQLPFVIAVTGAIISSIITVFGPYKLREITNLITDGLVGEMDLGAISNIGLFLVFLYVVGSL
INYAQGYAISDMIQHFSKRLRTAIAEKINRLPLSYFDSHSQGDTLSRVTNDVDTVGQSLTQSLGTLISSVLLLIAVLFMM
FYTNVVLSFVTIGSVLLGFVFSAVLMAKSQRYFQEQQSNLAAINGYVEEMYSGHNVITSYNGAEKTRLAFNALNQNLYTS
MWKSQFISGIMFPLMNFVGNFGYVMVVIVGATMAINGSISMGTIVAFMVYVRIFSQPLSQIAQGITTLQSASAAMGRVFE
FLAEGDMEDDSHKLQQLTSVKGHVRFKDVFFGYNPDKTIIHDFSAEAKAGQKIAIVGPTGAGKTTIVNLLMKFYDIERGQ
IMIDGVDIKDMQRSEVHGAFSMVLQDTWLFEGTIKENLIYNQKDITDQAVVEAAKAVGVHHFIMTLPDGYDTVLDDTVSL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGS
HDQLMEQGGFYADLYNSQFVEEEQE

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=1127988 FGL23_RS08645 WP_061603332.1 1799269..1801026(-) (rcrQ) [Streptococcus gordonii strain NCTC10231]
ATGGAAAATAAAAAAACACCTTTATTTACCCAGATGAAGCCCTATATTAAAGGCTTCCAGCTTCCTTTTGTCATTGCAGT
AACCGGTGCAATCATCTCTAGTATTATTACAGTCTTTGGTCCTTATAAGTTGCGTGAGATCACGAACTTAATTACAGATG
GTCTAGTAGGTGAGATGGATTTGGGAGCTATCTCAAATATAGGTTTGTTCTTAGTTTTTCTTTATGTTGTGGGCTCTCTT
ATCAATTATGCACAGGGTTATGCTATTTCGGATATGATTCAGCACTTTTCAAAACGTTTGAGAACTGCGATTGCAGAGAA
AATCAACCGCCTGCCATTAAGTTACTTTGATAGTCATTCTCAAGGCGATACCCTATCACGGGTGACAAATGATGTAGATA
CAGTCGGACAATCGTTGACACAGAGCTTGGGGACTCTGATTTCTTCGGTCTTACTTTTAATTGCTGTACTCTTTATGATG
TTTTATACGAATGTTGTACTTTCATTTGTGACGATTGGTTCGGTCTTATTGGGATTTGTTTTCTCAGCAGTTCTGATGGC
GAAATCTCAAAGATATTTCCAAGAACAGCAAAGTAATCTAGCAGCTATTAATGGTTATGTGGAAGAAATGTACTCCGGGC
ACAATGTTATCACTAGTTACAATGGTGCAGAAAAGACGCGCCTGGCCTTCAATGCCCTCAATCAAAATCTGTATACTAGT
ATGTGGAAGTCACAATTTATTTCAGGAATTATGTTTCCACTGATGAACTTTGTTGGTAATTTTGGCTATGTGATGGTTGT
GATTGTAGGTGCTACAATGGCTATTAATGGCTCCATTAGCATGGGAACGATTGTAGCTTTCATGGTCTATGTACGAATTT
TTTCTCAACCTCTTTCCCAAATCGCCCAGGGAATTACAACCCTCCAATCTGCTAGTGCAGCCATGGGACGAGTCTTTGAG
TTTTTAGCAGAAGGGGATATGGAAGATGATTCTCATAAACTTCAACAATTAACAAGTGTAAAAGGACATGTCCGGTTTAA
AGATGTCTTCTTTGGTTACAATCCTGATAAGACTATTATTCACGATTTCTCAGCAGAAGCAAAGGCTGGACAAAAAATTG
CAATTGTTGGCCCTACTGGTGCTGGTAAGACAACAATTGTCAACCTACTCATGAAGTTCTATGATATTGAACGTGGGCAA
ATCATGATTGACGGTGTGGATATCAAGGATATGCAACGCTCAGAAGTTCACGGTGCTTTCTCTATGGTTCTACAAGATAC
ATGGCTTTTTGAAGGGACTATTAAAGAAAACTTGATCTATAATCAGAAAGATATCACAGACCAAGCAGTTGTTGAAGCTG
CAAAAGCGGTTGGTGTCCACCACTTTATCATGACCTTGCCGGACGGCTATGATACAGTTCTGGATGACACAGTCAGCCTT
TCTGTTGGTCAAAAGCAGCTCCTGACTATTGCAAGGGCTCTGCTCAAAGATGCACCACTCCTTATCTTAGATGAGGCGAC
TTCCTCAGTCGATACACGGACAGAGGAATTGATTCAAAAAGCGATGGACAAGCTGATGGAAGGCAGGACTTCCTTTGTCA
TTGCTCACCGCCTATCCACTATTCGCAATGCTGATCTGATCTTAGTTATGCGTGATGGTAATATTATCGAGCAAGGAAGC
CATGACCAGCTCATGGAGCAGGGAGGTTTCTACGCCGATCTTTACAACAGTCAGTTCGTCGAAGAAGAGCAAGAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

70.79

99.487

0.704

Multiple sequence alignment