Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FGL23_RS02640 Genome accession   NZ_LR594049
Coordinates   569403..570134 (+) Length   243 a.a.
NCBI ID   WP_045505875.1    Uniprot ID   A0AAX1YIE4
Organism   Streptococcus gordonii strain NCTC10231     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 564403..575134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL23_RS02610 (NCTC10231_00519) - 564787..566211 (+) 1425 WP_061603634.1 NCS2 family permease -
  FGL23_RS02615 (NCTC10231_00520) tsaE 566294..566740 (+) 447 WP_061603635.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FGL23_RS02620 (NCTC10231_00521) - 566740..567264 (+) 525 WP_061603636.1 GNAT family N-acetyltransferase -
  FGL23_RS02625 (NCTC10231_00522) brpA 567271..568485 (+) 1215 WP_061603637.1 biofilm formation/cell division transcriptional regulator BrpA -
  FGL23_RS02630 (NCTC10231_00523) - 568535..568837 (-) 303 WP_061603638.1 hypothetical protein -
  FGL23_RS02635 (NCTC10231_00524) - 568848..569264 (-) 417 WP_061603639.1 HIT family protein -
  FGL23_RS02640 (NCTC10231_00525) pptA 569403..570134 (+) 732 WP_045505875.1 ABC transporter ATP-binding protein Regulator
  FGL23_RS02645 (NCTC10231_00526) pptB 570131..571186 (+) 1056 WP_061603640.1 ABC transporter permease Regulator
  FGL23_RS02650 (NCTC10231_00527) ccrZ 571227..572021 (+) 795 WP_061597313.1 cell cycle regulator CcrZ -
  FGL23_RS02655 (NCTC10231_00528) trmB 572018..572653 (+) 636 WP_048778825.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGL23_RS02660 (NCTC10231_00529) rimP 572765..573253 (+) 489 WP_012000044.1 ribosome maturation factor RimP -
  FGL23_RS02665 (NCTC10231_00530) nusA 573299..574540 (+) 1242 WP_045634222.1 transcription termination factor NusA -
  FGL23_RS02670 (NCTC10231_00531) rnpM 574551..574847 (+) 297 WP_008808548.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26845.28 Da        Isoelectric Point: 4.5658

>NTDB_id=1127950 FGL23_RS02640 WP_045505875.1 569403..570134(+) (pptA) [Streptococcus gordonii strain NCTC10231]
MLEIKGLTGGYVNIPVLKDVSFEVGDGQLVGLIGLNGAGKSTTINEIIGLLTPYQGEILIDGLSLKSDRTAYRKKIGFIP
ETPSLYEELTLKEHIETVAMAYDIDSQTAIDRVDKLLQIFRLKDKLDWFPVNFSKGMKQKVMIICAFVIDPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGNLAQLREEFSLPEASLNEIYLALTEE
AAL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1127950 FGL23_RS02640 WP_045505875.1 569403..570134(+) (pptA) [Streptococcus gordonii strain NCTC10231]
ATGTTAGAAATAAAAGGGCTTACAGGTGGCTATGTCAATATTCCTGTTTTGAAAGATGTCAGTTTTGAAGTTGGAGACGG
TCAGCTTGTCGGACTGATTGGTCTAAACGGGGCTGGAAAGTCAACAACCATCAATGAAATAATCGGTCTCTTGACGCCTT
ATCAAGGGGAAATTTTGATAGATGGTTTGAGCCTGAAGTCAGACAGGACAGCCTATCGCAAAAAGATTGGTTTTATACCT
GAAACACCGAGTCTCTATGAAGAATTAACCTTGAAGGAACATATTGAGACGGTTGCTATGGCTTATGATATTGACTCGCA
AACAGCAATAGATCGAGTGGATAAATTGCTTCAGATTTTTCGTCTTAAAGACAAGTTAGATTGGTTTCCGGTTAATTTCT
CAAAGGGAATGAAGCAGAAGGTTATGATCATCTGTGCCTTTGTGATTGACCCTAGTTTGTTTATTGTGGATGAACCCTTT
TTAGGATTGGATCCTCTGGCCATCTCTGATTTGATTGAGCTCTTGGCAGAAGAAAAGGCTAAAGGGAAGTCTATCCTGAT
GAGTACTCATGTGCTTGATTCGGCAGAGAAAATGTGTGATTCTTTTGTTATCTTGCACAAGGGTCAGGTACGGGCTAAAG
GAAATTTAGCACAGTTGCGAGAAGAATTTTCATTGCCAGAAGCAAGTCTCAATGAAATCTACCTAGCTTTGACAGAAGAG
GCTGCCTTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

98.354

0.733
  pptA Streptococcus thermophilus LMD-9

73.64

98.354

0.724

Multiple sequence alignment