Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   M036_RS04435 Genome accession   NZ_CP005997
Coordinates   867015..867809 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis TO-A     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 862015..872809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M036_RS04405 (M036_04345) sxzA 862854..863885 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  M036_RS04410 (M036_04350) yfhB 864000..864881 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  M036_RS04415 (M036_04355) yfhC 864969..865553 (+) 585 WP_003243940.1 nitroreductase -
  M036_RS04420 (M036_04360) yfhD 865592..865783 (-) 192 WP_003233561.1 YfhD family protein -
  M036_RS04425 (M036_04365) yfhE 865850..865960 (-) 111 WP_003223230.1 YfhE family protein -
  M036_RS04430 (M036_04370) yfhF 866015..866926 (-) 912 WP_048217629.1 TIGR01777 family oxidoreductase -
  M036_RS04435 (M036_04375) recX 867015..867809 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  M036_RS04440 (M036_04380) yfhH 867811..868125 (+) 315 WP_003244592.1 YfhH family protein -
  M036_RS04450 (M036_04390) yfhI 868268..869461 (+) 1194 WP_003243500.1 MFS transporter -
  M036_RS04455 (M036_04395) sspK 869494..869646 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  M036_RS04460 (M036_04400) yfhJ 869771..870040 (+) 270 WP_003243789.1 YfhJ family protein -
  M036_RS04465 (M036_04405) yfhK 870185..870703 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  M036_RS04470 (M036_04410) spdL 870788..871120 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  M036_RS04475 (M036_04415) ephM 871107..871967 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=112795 M036_RS04435 WP_003243354.1 867015..867809(+) (recX) [Bacillus subtilis TO-A]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=112795 M036_RS04435 WP_003243354.1 867015..867809(+) (recX) [Bacillus subtilis TO-A]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment