Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   FGL21_RS11210 Genome accession   NZ_LR594047
Coordinates   2232273..2233049 (+) Length   258 a.a.
NCBI ID   WP_003054458.1    Uniprot ID   A0A9X5R320
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2227273..2238049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL21_RS11190 (NCTC11554_02320) - 2229043..2230026 (+) 984 WP_014612660.1 IS30 family transposase -
  FGL21_RS11200 (NCTC11554_02322) rlmH 2230270..2230749 (-) 480 WP_003057960.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGL21_RS11205 (NCTC11554_02323) htrA 2230961..2232184 (+) 1224 WP_003054444.1 trypsin-like peptidase domain-containing protein Regulator
  FGL21_RS11210 (NCTC11554_02324) spo0J 2232273..2233049 (+) 777 WP_003054458.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29136.15 Da        Isoelectric Point: 10.3001

>NTDB_id=1127887 FGL21_RS11210 WP_003054458.1 2232273..2233049(+) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKTTPTQKNKNIFITSLEDQLAQSLGLPAKIKLKSTQSGQL
LLPFANQEELNRIINKLL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1127887 FGL21_RS11210 WP_003054458.1 2232273..2233049(+) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTCTCACACTAACCGACGAAAAGGAACAGTTAGTTTATGCTAATAGAATCAAAAATGAAGGGTT
AAGTGTACGACAAATTGAGCATATGGTAACTCCAAAACTCAAAACCACCCCTACCCAGAAAAATAAAAATATTTTTATCA
CTTCTTTAGAAGATCAGCTGGCCCAATCTCTAGGGCTACCAGCCAAAATCAAATTGAAATCAACTCAGAGTGGTCAATTG
CTGTTACCATTTGCTAATCAAGAGGAATTAAACAGAATTATCAACAAGTTGCTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.198

99.612

0.57


Multiple sequence alignment