Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FGL21_RS10710 Genome accession   NZ_LR594047
Coordinates   2138129..2138842 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2133129..2143842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL21_RS10700 (NCTC11554_02223) treC 2134199..2135827 (-) 1629 WP_003058763.1 alpha,alpha-phosphotrehalase -
  FGL21_RS10705 (NCTC11554_02224) treP 2135894..2137918 (-) 2025 WP_003058731.1 PTS system trehalose-specific EIIBC component -
  FGL21_RS10710 (NCTC11554_02225) treR 2138129..2138842 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  FGL21_RS10720 (NCTC11554_02226) - 2139124..2139462 (-) 339 WP_003058780.1 helix-turn-helix domain-containing protein -
  FGL21_RS10725 (NCTC11554_02227) - 2139658..2140515 (+) 858 WP_003058766.1 VOC family protein -
  FGL21_RS10730 (NCTC11554_02228) yaaA 2140557..2141288 (+) 732 WP_003058734.1 peroxide stress protein YaaA -
  FGL21_RS10735 (NCTC11554_02229) nrdG 2141461..2142075 (-) 615 WP_003058750.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  FGL21_RS10740 (NCTC11554_02230) - 2142079..2142582 (-) 504 WP_003058815.1 GNAT family N-acetyltransferase -
  FGL21_RS10745 (NCTC11554_02231) - 2142591..2143526 (-) 936 WP_014612632.1 Gfo/Idh/MocA family oxidoreductase -
  FGL21_RS11315 (NCTC11554_02232) - 2143555..2143701 (-) 147 WP_003053094.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1127883 FGL21_RS10710 WP_002982243.1 2138129..2138842(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1127883 FGL21_RS10710 WP_002982243.1 2138129..2138842(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment