Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FGL18_RS08350 Genome accession   NZ_LR594046
Coordinates   1728364..1729089 (-) Length   241 a.a.
NCBI ID   WP_138126341.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain NCTC6403     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1723364..1734089
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL18_RS08320 (NCTC6403_01712) nusA 1723558..1724715 (-) 1158 WP_003052330.1 transcription termination factor NusA -
  FGL18_RS08325 (NCTC6403_01713) rimP 1724858..1725352 (-) 495 WP_044022604.1 ribosome maturation factor RimP -
  FGL18_RS08335 (NCTC6403_01715) trmB 1725837..1726472 (-) 636 WP_138126337.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGL18_RS08340 (NCTC6403_01716) - 1726472..1727263 (-) 792 WP_003052472.1 phosphotransferase family protein -
  FGL18_RS08345 (NCTC6403_01717) - 1727327..1728361 (-) 1035 WP_138126339.1 ABC transporter permease -
  FGL18_RS08350 (NCTC6403_01718) pptA 1728364..1729089 (-) 726 WP_138126341.1 ABC transporter ATP-binding protein Regulator
  FGL18_RS08355 (NCTC6403_01719) - 1729161..1729580 (+) 420 WP_012767493.1 HIT family protein -
  FGL18_RS08360 (NCTC6403_01720) - 1729577..1729897 (+) 321 WP_138126343.1 chemotaxis protein -
  FGL18_RS08365 (NCTC6403_01721) - 1730059..1731327 (-) 1269 WP_138126345.1 LCP family protein -
  FGL18_RS08370 (NCTC6403_01722) - 1731339..1731860 (-) 522 WP_138126347.1 N-acetyltransferase -
  FGL18_RS08375 (NCTC6403_01723) tsaE 1731853..1732296 (-) 444 WP_138126349.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FGL18_RS08380 (NCTC6403_01724) - 1732477..1733937 (-) 1461 WP_138126352.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26428.70 Da        Isoelectric Point: 4.6450

>NTDB_id=1127815 FGL18_RS08350 WP_138126341.1 1728364..1729089(-) (pptA) [Streptococcus dysgalactiae strain NCTC6403]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLAADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICVFVIDPSLFILDEPF
LGLDPLAISDLIQTLELEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1127815 FGL18_RS08350 WP_138126341.1 1728364..1729089(-) (pptA) [Streptococcus dysgalactiae strain NCTC6403]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATCTCGATTGATGGACTAACCTTGGCTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTTGCTATGGCCTATGATATTGACGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATTTGTGTTTTTGTGATTGATCCAAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGCTTGAAAAAGCCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTGCAGGATGCCTTTGGTGATGCTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

99.17

0.747
  pptA Streptococcus thermophilus LMD-9

74.477

99.17

0.739

Multiple sequence alignment