Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   FGL18_RS06910 Genome accession   NZ_LR594046
Coordinates   1430547..1432349 (-) Length   600 a.a.
NCBI ID   WP_138125999.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain NCTC6403     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1425547..1437349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL18_RS06885 (NCTC6403_01422) - 1426214..1426921 (-) 708 WP_138125990.1 O-methyltransferase -
  FGL18_RS06890 (NCTC6403_01423) - 1426973..1428184 (-) 1212 WP_084916498.1 OFA family MFS transporter -
  FGL18_RS06895 (NCTC6403_01424) - 1428517..1429140 (-) 624 WP_138125993.1 HAD-IA family hydrolase -
  FGL18_RS06900 (NCTC6403_01425) - 1429140..1429682 (-) 543 WP_138125995.1 GNAT family N-acetyltransferase -
  FGL18_RS06905 (NCTC6403_01426) - 1429805..1430359 (-) 555 WP_138125997.1 NADPH-dependent FMN reductase -
  FGL18_RS06910 (NCTC6403_01427) pepF 1430547..1432349 (-) 1803 WP_138125999.1 oligoendopeptidase F Regulator
  FGL18_RS06915 (NCTC6403_01428) - 1432360..1433322 (-) 963 WP_172601442.1 competence protein CoiA family protein -
  FGL18_RS06920 (NCTC6403_01429) - 1433434..1434594 (-) 1161 WP_138126003.1 MFS transporter -
  FGL18_RS06925 (NCTC6403_01430) - 1434686..1435402 (-) 717 WP_138126005.1 pseudouridine synthase -
  FGL18_RS06930 (NCTC6403_01431) nagB 1435506..1436219 (-) 714 WP_138126007.1 glucosamine-6-phosphate deaminase -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69182.95 Da        Isoelectric Point: 4.6827

>NTDB_id=1127807 FGL18_RS06910 WP_138125999.1 1430547..1432349(-) (pepF) [Streptococcus dysgalactiae strain NCTC6403]
MTDNRSHLEEKYTWDLSTIFATDKDWEAEVSGLASEIDAAKDFSGHLLDSSANLLTITDTYLELARRVEKVYVYAHMKND
QDTTVAKYQEYQAKASGLYAKFSEVFSFYDPEVMALSQEDYQAFLAETPDLKRYHHFFDKLFQTRDHVLSQAEEELLAGA
QEIFNGAEETFSILDNADIVFPVVKNDKGEDVELTHGNFISLMESKDRSVRQAAYEAMYSTYEQFQHTYAKTLQTNVKVQ
NYKARVHKYDSARQAAMAANFIPEAVYDTLLETVNKHLPLLHRYLKLRQDVLGLDELKMYDVYTPLSETDLAIGYDEALE
KAEKVLAVFGKDYADRVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLYTLVHETGHSLHSTFTRET
QPYVYGDYSIFLAEIASTTNENIMTEALLNEVQDEKERFAILNHYLDGFRGTVFRQTQFAEFEHAIHQADQKGEVLTSEY
LNQLYAELNEKYYGLSKDDNHFIQYEWARIPHFYYNYYVYQYATGFAAASYLADKIVHGTQDDIDHYLTYLKSGNSDYPL
EVIAKAGVDMAKGDYLEAAFKVFEERLTELEALVAKGVHR

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1127807 FGL18_RS06910 WP_138125999.1 1430547..1432349(-) (pepF) [Streptococcus dysgalactiae strain NCTC6403]
ATGACAGATAATCGTAGTCATTTAGAAGAAAAGTACACTTGGGATTTGAGCACTATTTTTGCAACAGATAAGGATTGGGA
AGCTGAAGTCAGTGGCTTAGCTAGTGAAATTGACGCGGCTAAGGATTTTTCAGGTCATTTACTAGATTCTAGCGCTAATC
TGTTGACAATTACAGATACTTATTTAGAGTTAGCTCGTCGTGTTGAGAAAGTCTATGTCTATGCTCATATGAAAAATGAT
CAAGACACGACTGTTGCTAAATATCAAGAATATCAGGCTAAGGCTTCTGGCTTGTATGCTAAATTTAGCGAAGTGTTTTC
ATTCTATGACCCAGAAGTTATGGCATTGAGTCAGGAAGATTACCAAGCTTTTCTTGCGGAAACTCCTGATTTAAAAAGGT
ATCATCATTTCTTTGACAAATTGTTCCAGACACGTGACCATGTGCTTAGCCAGGCTGAAGAGGAATTATTAGCAGGAGCC
CAAGAAATTTTCAATGGCGCTGAAGAAACCTTTAGCATTCTGGATAACGCTGATATTGTCTTTCCAGTAGTTAAAAATGA
TAAGGGGGAAGATGTTGAATTAACCCATGGTAACTTCATCAGTTTAATGGAATCTAAAGATCGTAGCGTTCGCCAAGCTG
CTTACGAGGCAATGTATAGCACTTATGAACAGTTCCAACACACTTATGCTAAAACCTTACAAACAAATGTTAAGGTTCAA
AATTACAAGGCGCGTGTTCATAAATACGATTCAGCACGTCAAGCTGCCATGGCTGCTAACTTTATTCCAGAAGCTGTTTA
CGACACTTTATTAGAAACGGTTAACAAGCATTTACCACTTTTACACCGTTACTTGAAACTTCGCCAAGATGTTCTTGGTC
TAGATGAATTGAAGATGTATGATGTTTACACACCATTATCTGAAACAGACCTAGCCATTGGTTATGATGAGGCTTTGGAA
AAAGCTGAGAAGGTTTTGGCTGTTTTTGGTAAGGATTATGCAGACCGAGTGCACCGTGCCTTTACAGAACGTTGGATTGA
TGTTCATGTCAATAAAGGGAAGCGCTCTGGAGCTTATTCGGGCGGTTCCTACGACACCAATGCCTTTATGCTATTAAACT
GGCAAGATACCTTAGACAATCTATACACTTTAGTTCATGAAACTGGGCACAGTTTGCATTCTACTTTCACTCGTGAAACA
CAGCCTTATGTGTATGGGGATTACAGTATTTTCCTAGCAGAAATTGCATCCACCACTAATGAAAACATCATGACAGAAGC
TCTCTTAAATGAGGTGCAAGATGAGAAAGAACGCTTTGCCATTTTAAACCATTACCTTGACGGTTTCCGTGGCACCGTTT
TCCGTCAAACCCAATTTGCTGAGTTTGAACACGCGATCCATCAAGCTGATCAAAAAGGAGAAGTGTTAACGAGCGAATAC
CTCAACCAATTGTATGCTGAGTTGAATGAAAAGTATTATGGGTTGAGTAAAGACGATAATCATTTTATTCAGTATGAATG
GGCACGTATTCCTCACTTCTATTACAATTATTATGTTTATCAGTATGCTACAGGCTTTGCAGCAGCAAGTTATTTAGCCG
ATAAGATTGTTCACGGAACGCAAGACGATATTGATCATTACTTGACCTACCTCAAGTCAGGAAATTCTGACTACCCACTT
GAGGTCATCGCTAAAGCGGGTGTTGATATGGCAAAAGGTGACTATCTTGAAGCAGCCTTTAAAGTCTTCGAAGAACGTCT
AACAGAACTTGAAGCCCTTGTTGCAAAGGGAGTTCATCGCTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

71.786

99.833

0.717

Multiple sequence alignment