Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | M036_RS00235 | Genome accession | NZ_CP005997 |
| Coordinates | 44629..44919 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis TO-A | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39629..49919
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M036_RS00195 (M036_00190) | darA | 39652..39981 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| M036_RS00200 (M036_00195) | yaaR | 39994..40434 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| M036_RS00205 (M036_00200) | holB | 40446..41435 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| M036_RS00210 (M036_00205) | ricT | 41438..42265 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| M036_RS00215 (M036_00210) | yabA | 42280..42639 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| M036_RS00220 (M036_00215) | trmNF | 42698..43441 (+) | 744 | WP_003226765.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| M036_RS00225 (M036_00220) | yazA | 43428..43727 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| M036_RS00230 (M036_00225) | rsmI | 43702..44580 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| M036_RS00235 (M036_00230) | abrB | 44629..44919 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| M036_RS00240 (M036_00235) | metG | 45414..47408 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| M036_RS00245 (M036_00240) | dayD | 47487..48254 (+) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| M036_RS00250 (M036_00245) | yabE | 48410..49723 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=112780 M036_RS00235 WP_003226760.1 44629..44919(-) (abrB) [Bacillus subtilis TO-A]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=112780 M036_RS00235 WP_003226760.1 44629..44919(-) (abrB) [Bacillus subtilis TO-A]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |