Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FGL14_RS10640 Genome accession   NZ_LR594045
Coordinates   2121875..2122588 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2116875..2127588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL14_RS10630 (NCTC9413_02196) treC 2117945..2119573 (-) 1629 WP_138084075.1 alpha,alpha-phosphotrehalase -
  FGL14_RS10635 (NCTC9413_02197) treP 2119640..2121664 (-) 2025 WP_003059974.1 PTS system trehalose-specific EIIBC component -
  FGL14_RS10640 (NCTC9413_02198) treR 2121875..2122588 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  FGL14_RS10650 (NCTC9413_02199) - 2122870..2123208 (-) 339 WP_138084076.1 helix-turn-helix domain-containing protein -
  FGL14_RS10655 (NCTC9413_02200) - 2123394..2124251 (+) 858 WP_138084077.1 VOC family protein -
  FGL14_RS10660 (NCTC9413_02201) yaaA 2124293..2125024 (+) 732 WP_138084078.1 peroxide stress protein YaaA -
  FGL14_RS10665 (NCTC9413_02202) nrdG 2125197..2125811 (-) 615 WP_003058750.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  FGL14_RS10670 (NCTC9413_02203) - 2125815..2126318 (-) 504 WP_003058815.1 GNAT family N-acetyltransferase -
  FGL14_RS10675 (NCTC9413_02204) - 2126327..2127262 (-) 936 WP_138084079.1 Gfo/Idh/MocA family oxidoreductase -
  FGL14_RS11350 (NCTC9413_02205) - 2127291..2127437 (-) 147 WP_003053094.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1127764 FGL14_RS10640 WP_002982243.1 2121875..2122588(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1127764 FGL14_RS10640 WP_002982243.1 2121875..2122588(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAGGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTTAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment