Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FGL14_RS08020 Genome accession   NZ_LR594045
Coordinates   1569360..1570397 (-) Length   345 a.a.
NCBI ID   WP_015017242.1    Uniprot ID   A0A9X8T209
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1564360..1575397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL14_RS07995 (NCTC9413_01659) - 1565645..1566423 (-) 779 Protein_1504 substrate-binding domain-containing protein -
  FGL14_RS08000 (NCTC9413_01660) - 1566423..1566803 (-) 381 Protein_1505 ATP-binding cassette domain-containing protein -
  FGL14_RS08005 (NCTC9413_01661) rbsD 1566819..1567217 (-) 399 WP_003051896.1 D-ribose pyranase -
  FGL14_RS08010 (NCTC9413_01662) rbsK 1567192..1568103 (-) 912 WP_003061715.1 ribokinase -
  FGL14_RS08015 (NCTC9413_01663) - 1568096..1569079 (-) 984 WP_003053684.1 LacI family DNA-binding transcriptional regulator -
  FGL14_RS08020 (NCTC9413_01664) sepM 1569360..1570397 (-) 1038 WP_015017242.1 SepM family pheromone-processing serine protease Regulator
  FGL14_RS08025 (NCTC9413_01665) coaD 1570384..1570875 (-) 492 WP_065957290.1 pantetheine-phosphate adenylyltransferase -
  FGL14_RS08030 (NCTC9413_01666) rsmD 1570865..1571404 (-) 540 WP_014612463.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FGL14_RS08035 (NCTC9413_01667) asnA 1571680..1572672 (-) 993 WP_003061055.1 aspartate--ammonia ligase -
  FGL14_RS08040 (NCTC9413_01668) arcC 1572999..1573949 (-) 951 WP_012767309.1 carbamate kinase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37603.18 Da        Isoelectric Point: 9.4270

>NTDB_id=1127751 FGL14_RS08020 WP_015017242.1 1569360..1570397(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
MKTIKKIKWWLISLIALVALLIVLFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDISKDSTFKGTLNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSAEKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKDGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1127751 FGL14_RS08020 WP_015017242.1 1569360..1570397(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAGCCTAATTGCCCTCGTGGCTCTGCTTATCGTCCTTTTTTTCCC
TCTTCCTTATTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGATACCACAGGCGGTTATAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTAT
ATGTGTTAGATATTAGCAAGGATTCAACCTTTAAAGGTACTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGAGAAAATCGAGTTTAGTACCCAAGGTGTTGGGGGTCCTAGCGCAGGCTTAATGTTT
ACATTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACCATTGGTAA
AGATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.594

100

0.716


Multiple sequence alignment