Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   FGL14_RS07565 Genome accession   NZ_LR594045
Coordinates   1472762..1474564 (-) Length   600 a.a.
NCBI ID   WP_003060489.1    Uniprot ID   A0A9X8XH27
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1467762..1479564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL14_RS07540 (NCTC9413_01567) - 1468430..1469137 (-) 708 WP_015057801.1 O-methyltransferase -
  FGL14_RS07545 (NCTC9413_01568) - 1469189..1470400 (-) 1212 WP_015017194.1 OFA family MFS transporter -
  FGL14_RS07550 (NCTC9413_01569) - 1470733..1471356 (-) 624 WP_138083944.1 HAD-IA family hydrolase -
  FGL14_RS07555 (NCTC9413_01570) - 1471356..1471898 (-) 543 WP_138083945.1 GNAT family N-acetyltransferase -
  FGL14_RS07560 (NCTC9413_01571) - 1472028..1472576 (-) 549 WP_014612427.1 NADPH-dependent FMN reductase -
  FGL14_RS07565 (NCTC9413_01572) pepF 1472762..1474564 (-) 1803 WP_003060489.1 oligoendopeptidase F Regulator
  FGL14_RS07570 (NCTC9413_01573) - 1474575..1475537 (-) 963 WP_172600563.1 competence protein CoiA family protein -
  FGL14_RS07575 (NCTC9413_01574) - 1475649..1476809 (-) 1161 WP_015017197.1 MFS transporter -
  FGL14_RS07580 (NCTC9413_01575) - 1476901..1477617 (-) 717 WP_003060776.1 pseudouridine synthase -
  FGL14_RS07585 (NCTC9413_01576) nagB 1477721..1478434 (-) 714 WP_003056370.1 glucosamine-6-phosphate deaminase -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69149.88 Da        Isoelectric Point: 4.6804

>NTDB_id=1127748 FGL14_RS07565 WP_003060489.1 1472762..1474564(-) (pepF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
MTDNRSHLEEKYTWDLSTIFATDKDWEAEVSGLASEIDAAKDFSGHLLDSSANLLTITDTYLELARRVEKVYVYAHMKND
QDTTVAKYQEYQAKASGLYAKFSEVFSFYDPEVMALSQEDYQAFLAETPDLKRYHHFFDKLFQTRDHVLSQAEEELLAGA
QEIFNGAEETFSILDNADIVFPVVKNDKGEDVELTHGNFISLMESKDRSVRQAAYEAMYSTYEQFQHTYAKTLQTNVKVQ
NYKARVHKYDSARQAAMAANFIPEAVYDTLLETVNKHLPLLHRYLKLRQDVLGLDELKMYDVYTPLSETDLAIGYDEALE
KAEKVLAVFGKDYADRVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLYTLVHETGHSLHSTFTRET
QPYVYGDYSIFLAEIASTTNENIMTEALLNEVQDEKERFAILNHYLDGFRGTVFRQTQFAEFEHAIHQADQKGEVLTSEY
LNQLYADLNEKYYGLSKDDNHFIQYEWARIPHFYYNYYVYQYATGFAAASYLADKIVHGTQDDIDHYLTYLKSGNSDYPL
EVIAKAGVDMAKGDYLEAAFKVFEERLTELEALVAKGVHH

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1127748 FGL14_RS07565 WP_003060489.1 1472762..1474564(-) (pepF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
ATGACAGATAATCGTAGTCATTTAGAAGAAAAGTACACTTGGGATTTGAGCACTATTTTTGCAACAGATAAGGATTGGGA
AGCTGAAGTCAGTGGCTTAGCTAGTGAAATTGACGCGGCTAAGGATTTTTCAGGTCATTTACTAGATTCTAGCGCTAATC
TGTTGACAATTACAGACACTTATTTAGAGTTAGCTCGTCGTGTTGAGAAAGTCTATGTCTATGCTCATATGAAAAATGAT
CAAGACACGACTGTTGCTAAATATCAAGAATATCAGGCTAAGGCTTCTGGCTTGTATGCTAAATTTAGCGAAGTGTTTTC
ATTCTATGACCCAGAAGTTATGGCATTGAGTCAGGAAGATTACCAAGCTTTTCTTGCGGAAACTCCTGATTTAAAAAGGT
ATCATCATTTCTTTGACAAATTGTTCCAGACACGTGACCATGTGCTTAGCCAGGCTGAAGAGGAATTATTAGCAGGAGCC
CAAGAAATTTTCAATGGCGCTGAAGAAACCTTTAGCATTCTGGATAACGCTGATATTGTCTTTCCAGTAGTTAAAAATGA
TAAGGGGGAAGATGTTGAATTAACCCATGGTAACTTCATCAGTTTAATGGAATCTAAAGATCGTAGCGTTCGCCAAGCTG
CTTACGAGGCAATGTATAGCACTTATGAACAGTTCCAACACACTTATGCTAAAACCTTACAAACAAATGTTAAGGTTCAA
AATTACAAGGCGCGTGTTCATAAATACGATTCAGCACGTCAAGCTGCCATGGCTGCTAACTTTATTCCAGAAGCTGTTTA
CGACACTTTATTAGAAACGGTTAACAAACATTTACCACTTTTACACCGTTACTTGAAACTTCGCCAAGATGTTCTTGGTC
TAGATGAGTTGAAGATGTATGATGTTTACACACCATTATCTGAAACAGACCTAGCCATTGGTTATGATGAGGCTTTGGAA
AAAGCTGAGAAGGTTTTGGCTGTTTTTGGTAAGGATTATGCAGACCGAGTGCATCGTGCCTTTACAGAACGTTGGATTGA
TGTTCATGTCAATAAAGGGAAGCGCTCTGGAGCTTATTCGGGTGGTTCCTACGATACCAATGCCTTTATGCTATTAAACT
GGCAAGATACCTTAGACAATCTATACACTTTAGTTCATGAAACTGGGCACAGTTTGCATTCTACTTTCACTCGTGAAACA
CAGCCTTATGTGTATGGAGATTACAGTATTTTCCTAGCAGAAATTGCATCCACAACTAATGAAAACATCATGACAGAAGC
TCTCTTAAATGAGGTTCAAGATGAGAAAGAACGCTTTGCTATTTTAAACCATTACCTTGACGGTTTCCGTGGCACTGTTT
TCCGTCAAACCCAATTTGCTGAGTTTGAACACGCGATCCATCAAGCTGATCAAAAAGGAGAAGTGTTAACGAGCGAATAC
CTCAACCAATTGTATGCTGATTTGAATGAAAAGTATTATGGGTTGAGTAAAGACGATAATCATTTTATTCAATATGAGTG
GGCACGTATTCCTCACTTCTATTATAATTATTATGTTTATCAGTATGCTACAGGCTTTGCAGCAGCAAGTTATTTAGCCG
ATAAGATTGTTCACGGAACGCAAGACGATATTGATCATTACTTGACCTACCTCAAGTCAGGAAATTCTGACTACCCACTT
GAGGTCATCGCTAAAGCGGGTGTTGATATGGCAAAAGGTGACTATCTTGAAGCAGCCTTTAAAGTCTTCGAAGAACGTCT
AACAGAACTTGAAGCCCTTGTTGCAAAAGGAGTTCATCACTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

71.953

99.833

0.718

Multiple sequence alignment