Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FGL05_RS06495 Genome accession   NZ_LR594044
Coordinates   1331315..1332400 (-) Length   361 a.a.
NCBI ID   WP_020916344.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain NCTC8796     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1326315..1337400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL05_RS06470 (NCTC8796_01379) - 1327275..1327781 (-) 507 WP_020916349.1 VanZ family protein -
  FGL05_RS06475 (NCTC8796_01380) rlmN 1327791..1328891 (-) 1101 WP_020916348.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  FGL05_RS06480 (NCTC8796_01381) - 1328952..1329473 (-) 522 WP_111712659.1 YutD-like domain-containing protein -
  FGL05_RS06485 (NCTC8796_01382) - 1329503..1330831 (-) 1329 WP_043894980.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  FGL05_RS06490 (NCTC8796_01383) - 1330936..1331184 (-) 249 WP_043894978.1 DUF3923 family protein -
  FGL05_RS06495 (NCTC8796_01384) sepM 1331315..1332400 (-) 1086 WP_020916344.1 SepM family pheromone-processing serine protease Regulator
  FGL05_RS06500 (NCTC8796_01385) coaD 1332378..1332875 (-) 498 WP_058833202.1 pantetheine-phosphate adenylyltransferase -
  FGL05_RS06505 (NCTC8796_01386) rsmD 1332907..1333446 (-) 540 WP_058814365.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FGL05_RS06510 (NCTC8796_01387) - 1333578..1334420 (+) 843 WP_111712658.1 hypothetical protein -
  FGL05_RS06515 (NCTC8796_01388) - 1334592..1335323 (+) 732 WP_111712657.1 hypothetical protein -
  FGL05_RS06520 (NCTC8796_01389) asnA 1335457..1336449 (-) 993 WP_058813699.1 aspartate--ammonia ligase -
  FGL05_RS09140 - 1337009..1337308 (-) 300 Protein_1325 macrolide ABC transporter permease -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39221.49 Da        Isoelectric Point: 5.4865

>NTDB_id=1127683 FGL05_RS06495 WP_020916344.1 1331315..1332400(-) (sepM) [Streptococcus lutetiensis strain NCTC8796]
MTILNAFKGILKKLGRILYRFKWWILGVVGTVFLIFSLFYPLDYYVEMPGGAYDVRSVLTVNNKTDKDEGSYNFVAVTVN
QATLAQLVYAWLTPHTEISTAAATTGGYSNEDYMRINQYYMETSQNTATYQALTLAGKDVKLDYQGVYVLNVTKNSTFKG
LLHLADTVTGVNGKTFKSSQELMAYVADLDLGSKVTIQEISNGKTKEVSGKIIELPNGKNGIGIGLVDHTKVSSDVDVTF
DTSGVGGPSAGLMFTLDIYDQVNNEDLRKGRKIAGTGTIESDGSVGDIGGAGLKVVSAAKSGADIFFIPNNPVDKETLKK
NPDAKTNYEEAKEAAKGLDTDMKIVPVKNVQEAIDYLRSTN

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=1127683 FGL05_RS06495 WP_020916344.1 1331315..1332400(-) (sepM) [Streptococcus lutetiensis strain NCTC8796]
ATGACAATCTTAAACGCATTTAAAGGGATTTTGAAAAAGTTAGGTCGTATTTTATACCGCTTTAAATGGTGGATACTAGG
AGTAGTGGGAACTGTATTTCTTATCTTTAGTTTATTTTATCCCCTCGACTATTATGTTGAAATGCCTGGCGGTGCTTATG
ATGTTCGTAGTGTTTTGACTGTTAATAACAAAACAGATAAAGATGAAGGCTCTTATAACTTTGTAGCGGTGACGGTGAAT
CAAGCGACGCTTGCTCAGCTGGTTTATGCTTGGTTAACACCGCATACGGAGATTTCAACGGCTGCCGCAACAACAGGGGG
CTACAGTAATGAAGATTACATGCGTATTAATCAATACTACATGGAAACTTCACAAAATACAGCGACTTACCAAGCTTTAA
CCCTAGCAGGAAAAGATGTTAAGCTTGATTATCAGGGTGTTTATGTCCTAAATGTAACCAAAAATTCAACCTTTAAAGGA
CTTTTACATCTAGCTGATACGGTTACTGGTGTAAATGGAAAAACGTTCAAGAGTTCACAAGAATTGATGGCTTATGTAGC
AGACTTGGATCTTGGCTCTAAAGTCACTATTCAAGAAATTTCAAATGGTAAAACAAAAGAGGTTTCTGGTAAAATCATTG
AATTGCCAAATGGTAAAAATGGTATCGGCATTGGTTTAGTCGATCATACCAAGGTGTCATCTGATGTCGATGTGACTTTT
GATACCAGTGGTGTTGGTGGACCTAGTGCAGGCTTGATGTTCACCCTTGATATTTATGATCAAGTTAATAACGAAGACCT
TCGTAAAGGTCGTAAAATTGCTGGTACTGGTACCATTGAATCAGATGGTTCTGTTGGTGATATCGGCGGAGCAGGCTTAA
AAGTTGTCTCAGCTGCCAAATCTGGTGCAGATATTTTCTTTATTCCAAATAATCCAGTCGATAAAGAAACATTGAAAAAA
AATCCTGATGCTAAGACAAATTACGAAGAAGCCAAAGAAGCTGCTAAAGGCCTTGATACAGACATGAAAATTGTCCCTGT
CAAGAATGTCCAAGAAGCGATTGATTACCTAAGAAGTACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.552

93.906

0.634


Multiple sequence alignment