Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | FGL06_RS05465 | Genome accession | NZ_LR594042 |
| Coordinates | 1077772..1078212 (-) | Length | 146 a.a. |
| NCBI ID | WP_126437902.1 | Uniprot ID | - |
| Organism | Streptococcus equinus strain NCTC8133 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1068069..1093429 | 1077772..1078212 | within | 0 |
Gene organization within MGE regions
Location: 1068069..1093429
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL06_RS05420 (NCTC8133_01095) | - | 1068069..1068914 (+) | 846 | WP_126437899.1 | aldo/keto reductase | - |
| FGL06_RS05425 (NCTC8133_01096) | - | 1068950..1070173 (-) | 1224 | WP_126437900.1 | ATP-binding protein | - |
| FGL06_RS05430 (NCTC8133_01097) | - | 1070181..1070861 (-) | 681 | WP_126437901.1 | response regulator transcription factor | - |
| FGL06_RS05435 (NCTC8133_01098) | - | 1070877..1071494 (-) | 618 | WP_033152788.1 | GTP pyrophosphokinase family protein | - |
| FGL06_RS05440 (NCTC8133_01099) | - | 1071584..1071745 (-) | 162 | Protein_1010 | ABC transporter permease | - |
| FGL06_RS05445 (NCTC8133_01100) | - | 1071770..1072210 (-) | 441 | WP_074669201.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| FGL06_RS09245 (NCTC8133_01101) | - | 1072213..1074084 (-) | 1872 | WP_164554312.1 | hypothetical protein | - |
| FGL06_RS05455 (NCTC8133_01102) | rcrQ | 1074192..1075964 (-) | 1773 | WP_074628589.1 | ABC transporter ATP-binding protein | Regulator |
| FGL06_RS05460 (NCTC8133_01103) | rcrP | 1075954..1077768 (-) | 1815 | WP_094140470.1 | ABC transporter ATP-binding protein | Regulator |
| FGL06_RS05465 (NCTC8133_01104) | rcrR | 1077772..1078212 (-) | 441 | WP_126437902.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| FGL06_RS05470 (NCTC8133_01105) | - | 1078360..1078770 (-) | 411 | WP_027968635.1 | peptide deformylase | - |
| FGL06_RS05475 (NCTC8133_01106) | - | 1078773..1079276 (-) | 504 | WP_126437903.1 | GNAT family N-acetyltransferase | - |
| FGL06_RS05480 (NCTC8133_01107) | gdhA | 1079429..1080778 (-) | 1350 | WP_021142476.1 | NADP-specific glutamate dehydrogenase | - |
| FGL06_RS05485 (NCTC8133_01108) | - | 1081008..1081505 (+) | 498 | WP_021142477.1 | DUF308 domain-containing protein | - |
| FGL06_RS09250 (NCTC8133_01109) | queF | 1081544..1082035 (-) | 492 | WP_021142478.1 | preQ(1) synthase | - |
| FGL06_RS09255 (NCTC8133_01110) | queE | 1082051..1082764 (-) | 714 | WP_186330482.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| FGL06_RS05495 (NCTC8133_01111) | queD | 1082757..1083203 (-) | 447 | WP_024343959.1 | 6-carboxytetrahydropterin synthase QueD | - |
| FGL06_RS05500 (NCTC8133_01112) | queC | 1083203..1083856 (-) | 654 | WP_004232125.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| FGL06_RS05505 (NCTC8133_01113) | - | 1084022..1085791 (-) | 1770 | WP_126437904.1 | ABC transporter ATP-binding protein | - |
| FGL06_RS05510 (NCTC8133_01114) | - | 1085794..1087533 (-) | 1740 | WP_126437905.1 | ABC transporter ATP-binding protein | - |
| FGL06_RS05515 (NCTC8133_01115) | - | 1087577..1089445 (-) | 1869 | WP_126437906.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| FGL06_RS05520 (NCTC8133_01116) | - | 1089442..1090647 (-) | 1206 | WP_126437907.1 | CCA tRNA nucleotidyltransferase | - |
| FGL06_RS05525 (NCTC8133_01117) | dapB | 1090644..1091411 (-) | 768 | WP_004232139.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| FGL06_RS05530 (NCTC8133_01118) | - | 1091432..1092280 (-) | 849 | WP_021142488.1 | DegV family protein | - |
| FGL06_RS05535 (NCTC8133_01119) | - | 1092280..1092660 (-) | 381 | WP_021142489.1 | DUF1149 family protein | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 17082.58 Da Isoelectric Point: 7.4038
>NTDB_id=1127580 FGL06_RS05465 WP_126437902.1 1077772..1078212(-) (rcrR) [Streptococcus equinus strain NCTC8133]
MRDKDPFSQLRDFVNLMENRVHELGELHDVENLAGPQGFAVLYLRDNEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IKVVPSEVDKRYKRVVLTELGRAKTKDIDDFHAAVHKQIFDGISREELEISGRVFDRILKNLENKE
MRDKDPFSQLRDFVNLMENRVHELGELHDVENLAGPQGFAVLYLRDNEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IKVVPSEVDKRYKRVVLTELGRAKTKDIDDFHAAVHKQIFDGISREELEISGRVFDRILKNLENKE
Nucleotide
Download Length: 441 bp
>NTDB_id=1127580 FGL06_RS05465 WP_126437902.1 1077772..1078212(-) (rcrR) [Streptococcus equinus strain NCTC8133]
ATGCGAGATAAAGATCCGTTTTCACAATTAAGAGACTTCGTTAATTTGATGGAAAACCGTGTGCACGAACTCGGTGAACT
TCATGATGTGGAGAACTTAGCTGGTCCGCAGGGGTTTGCGGTTTTATATTTGAGAGATAATGAAGATAAAGAAGTTTTCA
TTAAAGATATTGAACGTAAGCTTAAAATTTCAAAATCTGTAACCAGTAATTTGATTAAAAGAATGGAAAAGAATGGTTTT
ATAAAAGTTGTTCCATCTGAAGTAGATAAACGTTACAAGCGTGTAGTGCTTACTGAACTTGGTCGAGCTAAGACAAAAGA
TATTGATGACTTTCACGCTGCGGTTCACAAGCAAATTTTTGATGGCATTAGTCGTGAAGAGCTAGAAATTTCTGGTCGTG
TCTTTGATCGTATTTTGAAAAATTTAGAAAACAAGGAGTAA
ATGCGAGATAAAGATCCGTTTTCACAATTAAGAGACTTCGTTAATTTGATGGAAAACCGTGTGCACGAACTCGGTGAACT
TCATGATGTGGAGAACTTAGCTGGTCCGCAGGGGTTTGCGGTTTTATATTTGAGAGATAATGAAGATAAAGAAGTTTTCA
TTAAAGATATTGAACGTAAGCTTAAAATTTCAAAATCTGTAACCAGTAATTTGATTAAAAGAATGGAAAAGAATGGTTTT
ATAAAAGTTGTTCCATCTGAAGTAGATAAACGTTACAAGCGTGTAGTGCTTACTGAACTTGGTCGAGCTAAGACAAAAGA
TATTGATGACTTTCACGCTGCGGTTCACAAGCAAATTTTTGATGGCATTAGTCGTGAAGAGCTAGAAATTTCTGGTCGTG
TCTTTGATCGTATTTTGAAAAATTTAGAAAACAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
52.448 |
97.945 |
0.514 |