Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FGL06_RS02455 Genome accession   NZ_LR594042
Coordinates   461534..462619 (+) Length   361 a.a.
NCBI ID   WP_033152147.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 456534..467619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS02430 (NCTC8133_00487) - 457586..458800 (+) 1215 WP_126437643.1 MFS transporter -
  FGL06_RS02435 (NCTC8133_00488) asnA 459121..460113 (+) 993 WP_033152145.1 aspartate--ammonia ligase -
  FGL06_RS02440 (NCTC8133_00489) rsmD 460239..460778 (+) 540 WP_126438193.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FGL06_RS02445 (NCTC8133_00490) - 460768..461058 (+) 291 WP_039698470.1 hypothetical protein -
  FGL06_RS02450 (NCTC8133_00491) coaD 461059..461556 (+) 498 WP_126437644.1 pantetheine-phosphate adenylyltransferase -
  FGL06_RS02455 (NCTC8133_00492) sepM 461534..462619 (+) 1086 WP_033152147.1 SepM family pheromone-processing serine protease Regulator
  FGL06_RS02460 (NCTC8133_00493) - 462730..462975 (+) 246 WP_045798163.1 DUF3923 family protein -
  FGL06_RS02465 (NCTC8133_00494) - 463061..464392 (+) 1332 WP_126437645.1 bifunctional metallophosphatase/5'-nucleotidase -
  FGL06_RS02470 (NCTC8133_00495) - 464422..464982 (+) 561 WP_126437646.1 YutD family protein -
  FGL06_RS02475 (NCTC8133_00496) rlmN 465003..466103 (+) 1101 WP_021141827.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  FGL06_RS02480 (NCTC8133_00497) - 466114..466623 (+) 510 WP_027967897.1 VanZ family protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 38892.70 Da        Isoelectric Point: 4.4949

>NTDB_id=1127564 FGL06_RS02455 WP_033152147.1 461534..462619(+) (sepM) [Streptococcus equinus strain NCTC8133]
MTILNAFKGILKKIGRILYRLKWWILGIVGTAFIIFSLFCPLGYYVEMPGGAYDVRSVLTVNNKADKEDGSYNFVAVGVS
QATLAQLVYAWLTPHTEITTEAATTGGYSNADYMRINQYYMETSQNTATYQALTLAGKNVSLDYEGVYVLNVDKHSTFKG
LLHLADTVTGVNGKTFNSSAELMAYVADLDLGSDVTVQETSNGKSKEVSGKIIELPNGKNGIGIGLVDHTEVSSDVDVDF
ETSGFGGPSAGLMFTLDIYDQVNNEDLRKGRKIAGTGTINSDGSVGDIGGAGLKVVSAAKAGADVFFVPNNPVDEETKKE
NPDAKTNYQEAKEAAKDLDTDMKIVPVTTVQEAIDYLRSTD

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=1127564 FGL06_RS02455 WP_033152147.1 461534..462619(+) (sepM) [Streptococcus equinus strain NCTC8133]
ATGACAATCTTAAACGCATTTAAAGGGATTTTGAAAAAGATAGGTCGTATTTTGTATCGCTTAAAATGGTGGATTTTAGG
TATTGTTGGCACTGCTTTTATTATCTTCAGCCTTTTTTGCCCACTTGGTTATTATGTTGAAATGCCTGGCGGTGCTTACG
ATGTTCGCAGTGTTTTAACGGTTAATAATAAAGCTGATAAAGAAGATGGCTCTTATAATTTTGTAGCTGTTGGGGTTAGT
CAAGCAACGCTTGCTCAGTTGGTTTATGCTTGGTTGACGCCGCACACTGAAATTACAACTGAAGCAGCAACGACTGGTGG
TTACAGCAACGCAGACTATATGCGCATTAACCAATATTATATGGAAACTTCTCAAAATACAGCGACCTATCAAGCACTAA
CTTTGGCAGGAAAGAATGTTAGTTTGGATTATGAAGGTGTGTATGTTTTGAATGTTGATAAGCATTCGACCTTCAAAGGT
CTGTTGCACCTTGCTGATACTGTGACAGGTGTTAACGGTAAAACTTTCAATAGTTCTGCAGAATTAATGGCTTATGTTGC
TGATTTAGATTTGGGTTCTGATGTGACTGTCCAAGAGACTTCTAACGGTAAGAGTAAAGAAGTTTCTGGGAAAATCATTG
AATTGCCAAATGGTAAAAATGGAATTGGTATCGGATTAGTCGACCATACAGAAGTTTCATCAGACGTTGATGTTGATTTT
GAAACGAGCGGTTTTGGCGGACCAAGTGCTGGTTTGATGTTCACTCTAGATATTTACGACCAAGTCAATAATGAAGATTT
GAGAAAAGGTCGTAAGATTGCTGGTACTGGTACGATTAATTCGGATGGTTCAGTTGGTGATATTGGCGGTGCTGGGTTAA
AAGTAGTGTCAGCTGCTAAGGCTGGTGCGGATGTTTTCTTTGTGCCTAATAACCCTGTGGATGAGGAAACGAAAAAAGAA
AATCCAGATGCTAAGACTAACTATCAAGAAGCAAAAGAAGCTGCTAAAGATTTAGATACTGACATGAAGATTGTTCCTGT
GACAACTGTTCAGGAAGCAATTGATTATTTGCGTAGCACAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

66.667

93.906

0.626


Multiple sequence alignment