Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FGL06_RS01890 Genome accession   NZ_LR594042
Coordinates   354675..355400 (+) Length   241 a.a.
NCBI ID   WP_039691903.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 349675..360400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS01860 (NCTC8133_00371) - 350097..351518 (+) 1422 WP_074484022.1 NCS2 family permease -
  FGL06_RS01865 (NCTC8133_00372) tsaE 351684..352127 (+) 444 WP_024344600.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FGL06_RS01870 (NCTC8133_00373) - 352120..352632 (+) 513 WP_126437605.1 GNAT family N-acetyltransferase -
  FGL06_RS01875 (NCTC8133_00374) brpA 352643..353809 (+) 1167 WP_126437606.1 biofilm formation/cell division transcriptional regulator BrpA -
  FGL06_RS01880 (NCTC8133_00375) - 353881..354195 (-) 315 WP_021141714.1 hypothetical protein -
  FGL06_RS01885 (NCTC8133_00376) - 354192..354611 (-) 420 WP_021141715.1 HIT family protein -
  FGL06_RS01890 (NCTC8133_00377) pptA 354675..355400 (+) 726 WP_039691903.1 ABC transporter ATP-binding protein Regulator
  FGL06_RS01895 (NCTC8133_00378) - 355403..356437 (+) 1035 WP_126437607.1 ABC transporter permease -
  FGL06_RS01900 (NCTC8133_00379) ccrZ 356471..357304 (+) 834 WP_045798213.1 cell cycle regulator CcrZ -
  FGL06_RS01905 (NCTC8133_00380) trmB 357304..357942 (+) 639 WP_021141720.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGL06_RS01910 (NCTC8133_00381) - 358244..358720 (+) 477 WP_186330474.1 hypothetical protein -
  FGL06_RS01915 (NCTC8133_00382) - 358662..359600 (+) 939 Protein_324 hypothetical protein -
  FGL06_RS01920 (NCTC8133_00383) rimP 359807..360304 (+) 498 WP_024344612.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26674.05 Da        Isoelectric Point: 4.8609

>NTDB_id=1127559 FGL06_RS01890 WP_039691903.1 354675..355400(+) (pptA) [Streptococcus equinus strain NCTC8133]
MLKIENLTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGLLTPYQGQITLDGLTLANNQADYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLEFEAAMARAKELLKLFRLSDKLDWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAVGNLAELREAFGQKDASLNDIYIALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1127559 FGL06_RS01890 WP_039691903.1 354675..355400(+) (pptA) [Streptococcus equinus strain NCTC8133]
ATGTTAAAAATTGAAAATCTTACAGGTGGATATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
TGAACTTGTTGGATTAATTGGGCTAAATGGTGCTGGAAAATCAACAACCATAAATGAAATTATTGGACTTTTGACGCCTT
ATCAAGGTCAAATTACGCTAGATGGTTTGACTTTGGCTAATAATCAAGCTGATTATCGTAAAAAAATTGGATTTATTCCT
GAAACACCAAGTTTATATGAAGAATTGACTTTGCGTGAGCATTTGGAAACTGTTGCTATGGCTTATGATCTTGAGTTTGA
GGCTGCTATGGCGCGTGCAAAAGAGTTGCTAAAACTTTTCCGTCTGTCTGATAAACTTGATTGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAGGTCATGATTATTTGTGCTTTCATGGTTAATCCAAGTCTGTTTATTGTTGATGAGCCGTTT
TTAGGATTGGATCCGTTGGCTATTTCTGATTTGACAGATTTGCTTGCGCAAGAAAAAGCTAAAGGTAAGGCGATTTTGAT
GTCGACACACGTGTTAGATGCTGCTGAAAAAATGTGTGACCGTTTTGTGATTTTGCATCATGGTCAAGTAAGAGCTGTAG
GAAATTTAGCTGAATTGCGAGAAGCTTTCGGTCAGAAAGACGCTAGCTTAAATGATATCTACATAGCTTTGACTAAAGAG
GGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.079

99.17

0.784
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772

Multiple sequence alignment