Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FGL12_RS02655 Genome accession   NZ_LR594041
Coordinates   566813..567544 (+) Length   243 a.a.
NCBI ID   WP_008808542.1    Uniprot ID   A8AVP4
Organism   Streptococcus gordonii strain NCTC9124     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 561813..572544
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL12_RS02625 (NCTC9124_00525) - 562202..563626 (+) 1425 WP_012000036.1 NCS2 family permease -
  FGL12_RS02630 (NCTC9124_00526) tsaE 563709..564155 (+) 447 WP_041789558.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FGL12_RS02635 (NCTC9124_00527) - 564155..564679 (+) 525 WP_138101137.1 GNAT family N-acetyltransferase -
  FGL12_RS02640 (NCTC9124_00528) - 564686..565897 (+) 1212 WP_012000039.1 LCP family protein -
  FGL12_RS02645 (NCTC9124_00529) - 565945..566247 (-) 303 WP_012000040.1 hypothetical protein -
  FGL12_RS02650 (NCTC9124_00530) - 566258..566674 (-) 417 WP_041789561.1 HIT family protein -
  FGL12_RS02655 (NCTC9124_00531) pptA 566813..567544 (+) 732 WP_008808542.1 ABC transporter ATP-binding protein Regulator
  FGL12_RS02660 (NCTC9124_00532) pptB 567541..568596 (+) 1056 WP_012000042.1 ABC transporter permease Regulator
  FGL12_RS02665 (NCTC9124_00533) - 568637..569431 (+) 795 WP_008808544.1 phosphotransferase family protein -
  FGL12_RS02670 (NCTC9124_00534) trmB 569428..570066 (+) 639 WP_012000043.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGL12_RS02675 (NCTC9124_00535) rimP 570175..570663 (+) 489 WP_012000044.1 ribosome maturation factor RimP -
  FGL12_RS02680 (NCTC9124_00536) nusA 570709..571950 (+) 1242 WP_012000045.1 transcription termination factor NusA -
  FGL12_RS02685 (NCTC9124_00537) - 571961..572257 (+) 297 WP_008808548.1 YlxR family protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26859.31 Da        Isoelectric Point: 4.5712

>NTDB_id=1127476 FGL12_RS02655 WP_008808542.1 566813..567544(+) (pptA) [Streptococcus gordonii strain NCTC9124]
MLEIKGLTGGYVNIPVLKDVSFEVGDGQLVGLIGLNGAGKSTTINEIIGLLTPYQGEILIDGLSLKSDRTAYRKKIGFIP
ETPSLYEELTLKEHIETVAMAYDIDSQTAIDRVEKLLQIFRLKDKLDWFPVNFSKGMKQKVMIICAFVIDPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGNLAQLREEFSLPEASLNEIYLALTEE
AAL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1127476 FGL12_RS02655 WP_008808542.1 566813..567544(+) (pptA) [Streptococcus gordonii strain NCTC9124]
ATGTTAGAAATAAAAGGGCTTACAGGTGGCTATGTCAATATTCCTGTTTTGAAAGATGTCAGTTTTGAAGTTGGAGACGG
TCAGCTTGTTGGACTGATTGGTCTAAACGGGGCTGGAAAGTCAACAACCATCAATGAAATAATCGGTCTCTTGACGCCTT
ATCAAGGGGAAATTTTGATAGATGGTTTGAGCCTGAAGTCAGACAGGACAGCCTATCGCAAAAAGATTGGTTTTATACCT
GAAACACCGAGTCTCTATGAAGAATTAACCTTGAAGGAACATATTGAGACGGTTGCTATGGCTTATGATATTGACTCGCA
AACAGCAATAGATCGAGTGGAAAAATTGCTTCAGATTTTTCGTCTTAAAGACAAGTTGGATTGGTTCCCGGTCAATTTCT
CAAAGGGAATGAAGCAGAAGGTTATGATCATCTGTGCCTTTGTGATTGACCCTAGTTTGTTTATTGTGGATGAACCCTTT
TTAGGATTGGATCCTCTGGCCATCTCTGATTTGATTGAGCTCTTGGCAGAAGAAAAGGCTAAAGGGAAGTCTATCCTGAT
GAGTACTCATGTGCTTGATTCGGCAGAGAAAATGTGCGATTCTTTTGTTATCTTGCACAAGGGTCAGGTACGGGCTAAAG
GAAATTTAGCACAGTTGCGAGAAGAATTTTCATTGCCAGAAGCAAGTCTCAATGAAATCTACCTAGCTTTGACAGAAGAG
GCTGCCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AVP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

98.354

0.728
  pptA Streptococcus thermophilus LMD-9

73.222

98.354

0.72

Multiple sequence alignment