Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   FGK97_RS02765 Genome accession   NZ_LR594037
Coordinates   541985..543787 (+) Length   600 a.a.
NCBI ID   WP_138099372.1    Uniprot ID   -
Organism   Streptococcus anginosus strain NCTC11064     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 536985..548787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK97_RS02745 (NCTC11064_00559) - 538575..538892 (+) 318 WP_021001470.1 PTS cellobiose transporter subunit IIA -
  FGK97_RS02750 (NCTC11064_00560) - 538915..539421 (+) 507 WP_037590317.1 hypothetical protein -
  FGK97_RS02755 (NCTC11064_00561) celB 539461..540804 (+) 1344 Protein_502 PTS cellobiose transporter subunit IIC -
  FGK97_RS02760 (NCTC11064_00562) coiA 541002..542033 (+) 1032 WP_021001472.1 competence protein CoiA Machinery gene
  FGK97_RS02765 (NCTC11064_00563) pepF 541985..543787 (+) 1803 WP_138099372.1 oligoendopeptidase F Regulator
  FGK97_RS02770 (NCTC11064_00564) - 543789..544472 (+) 684 WP_003025376.1 O-methyltransferase -
  FGK97_RS02775 (NCTC11064_00565) prsA 544579..545517 (+) 939 WP_003025374.1 peptidylprolyl isomerase PrsA -
  FGK97_RS02780 - 545655..546224 (+) 570 WP_080979220.1 LURP-one-related/scramblase family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69259.24 Da        Isoelectric Point: 4.5201

>NTDB_id=1127413 FGK97_RS02765 WP_138099372.1 541985..543787(+) (pepF) [Streptococcus anginosus strain NCTC11064]
MAKQRNEIEEKYTWDLTTIFPTDEAFEAELSQVSKELKEASNLAGHLLDSADSLLKTTEIQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQAFAFYEPEFMAITDEQYQTFLAEKPELQIYQHFFDKLLQKKPHILSQREEELLAGA
GEIFSAAGDTFGILDNADIVFPTVHDEEGNELQLTHGNYISLVESKNRTVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRNFSSAREAALSANFIPESVYDSLVSAVNKHLPLLHRYIALRAKILGLSDLKMYDLYTPLSEADYKFTYEEALM
KAEEVLAILGEDYLGRVKEAFSDRWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTREN
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDQTRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNDLYADLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALADKIVNGTQEDKEKYLNYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1127413 FGK97_RS02765 WP_138099372.1 541985..543787(+) (pepF) [Streptococcus anginosus strain NCTC11064]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGACCTAACAACGATTTTCCCAACAGATGAAGCTTTTGA
GGCAGAGTTAAGTCAAGTTTCAAAAGAATTAAAAGAAGCCAGCAACTTAGCAGGTCACCTTTTGGATTCAGCTGACAGCC
TCTTAAAAACAACAGAAATCCAATTGGACTTGATGCGTCGTATCGAAAAACTCTATTCCTATGCTCACATGAAAAATGAC
CAAGATACACGCGTGGCAAAATACCAAGAATACCAAGCCAAAGGAATGGCCATTTATAGCGAGTTCGGACAAGCCTTTGC
TTTTTATGAGCCAGAATTTATGGCAATCACAGACGAGCAATATCAGACTTTCTTAGCTGAAAAGCCTGAATTGCAAATCT
ATCAGCATTTCTTTGATAAGTTGCTGCAAAAGAAACCTCACATCCTTTCTCAACGTGAAGAAGAATTGTTGGCAGGAGCT
GGTGAAATTTTTAGTGCTGCGGGTGATACTTTTGGAATCTTAGACAATGCTGATATTGTCTTTCCAACCGTGCACGACGA
AGAAGGAAATGAATTGCAATTGACGCACGGAAATTACATTAGTTTAGTGGAGTCGAAAAATCGTACAGTCCGCAAGGAAG
CTTATGAAGCGCTTTACAGCGTCTATGAGCAATATCAACACACTTACGCCAAGACTCTCCAAACGAATGTTAAAGTTCAT
AATTACAATGCCAAAGTTCGTAATTTTTCTTCTGCGCGTGAAGCTGCTTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGATAGCTTAGTGTCTGCGGTAAACAAACACTTGCCACTCTTACATCGCTATATTGCGCTACGTGCAAAGATTTTAGGCC
TTTCTGATTTGAAAATGTATGACCTCTATACACCATTGTCAGAAGCAGATTACAAATTTACTTATGAGGAAGCCTTGATG
AAAGCAGAAGAAGTCTTAGCTATCCTTGGAGAAGATTATCTAGGTCGAGTAAAAGAAGCCTTTTCAGATCGTTGGATTGA
TGTTTATGAAAACCAAGGCAAGCGCTCTGGGGCTTATTCTGGTGGTTCTTACGATACCAATGCTTTTATGTTGCTCAACT
GGCAAGATACGTTGGACAATCTTTTCACGCTGGTTCATGAAACAGGTCACAGTATGCATTCTAGCTATACTCGTGAAAAT
CAGCCATACGTTTACGGAGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACGACCAATGAAAATATCCTGACGGAGAA
ATTATTGGAAGAAGTAGATGACGATCAAACCCGCTTTGCGATTCTGAATCATTTCTTGGACGGTTTCCGTGGAACTGTTT
TCCGCCAAACTCAATTTGCCGAGTTTGAACATGCCATTCACAAAGCTGACCAAGAAGGTCAAGTCTTGACGAGTGAATTT
TTGAATGATTTGTACGCAGATTTGAATGAAAAATATTATGGTTTGACGAAAGAAGACAACCCACAAATTCAATACGAATG
GGCACGGATTCCGCATTTCTACTATGATTACTATGTTTTTCAATACTCAACCGGTTTCTCAGCTGCTTCTGCCTTAGCAG
ATAAGATTGTTAACGGAACGCAAGAAGATAAAGAGAAGTATCTCAACTACTTGAAAGCAGGAAATTCTGATTATCCGCTA
AATGTCATTAAAAAAGCTGGTGTAGATATGGAAAAAGAAGACTATCTCAATGCTGCCTTTGCAGTCTTTGAACGTCGTCT
TGATGAATTTGAAGCACTCGTAGAAAAGTTAGGACTGGCATAA

Domains

Predicted by InterProScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

68.96

99.333

0.685

Multiple sequence alignment