Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FGK96_RS10050 Genome accession   NZ_LR594036
Coordinates   2083313..2084026 (+) Length   237 a.a.
NCBI ID   WP_138083402.1    Uniprot ID   A0A4V0A0L2
Organism   Streptococcus porcinus strain NCTC10710     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2078313..2089026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK96_RS10040 (NCTC10710_02075) treC 2079408..2081036 (-) 1629 WP_138083400.1 alpha,alpha-phosphotrehalase -
  FGK96_RS10045 (NCTC10710_02076) treP 2081101..2083095 (-) 1995 WP_138083401.1 PTS system trehalose-specific EIIBC component -
  FGK96_RS10050 (NCTC10710_02077) treR 2083313..2084026 (+) 714 WP_138083402.1 trehalose operon repressor Regulator
  FGK96_RS10055 - 2084189..2084392 (+) 204 WP_138083403.1 hypothetical protein -
  FGK96_RS10060 (NCTC10710_02078) yaaA 2084527..2085258 (+) 732 WP_138083404.1 peroxide stress protein YaaA -
  FGK96_RS10065 (NCTC10710_02079) nrdG 2085380..2085994 (-) 615 WP_138083405.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  FGK96_RS10070 (NCTC10710_02080) - 2086001..2086504 (-) 504 WP_138083406.1 GNAT family N-acetyltransferase -
  FGK96_RS10075 (NCTC10710_02081) - 2086515..2087447 (-) 933 WP_138083407.1 Gfo/Idh/MocA family protein -
  FGK96_RS10505 (NCTC10710_02082) - 2087469..2087618 (-) 150 WP_172601622.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27481.76 Da        Isoelectric Point: 9.7089

>NTDB_id=1127377 FGK96_RS10050 WP_138083402.1 2083313..2084026(+) (treR) [Streptococcus porcinus strain NCTC10710]
MKKYEYIFKDLESKISKGIYAIDDFLPPENELSKKYKASRDTIRKALALLVKDGLVKKQQGRGTQVIKHHQILFPISELT
SYQELVTYFNMDSKTNVIAIDKLIVDNDMSKLTGFPPRSIIWRITRQRVVDGIASVLDVDYLSKDIVPTISREVAEKSLY
QYLENDLNLAIDFALKEVTIDQVNDKDKILLDLGSDRHLVSVKSKVYLSSNEQFQFTESRHKLEKFKFVDFARRKPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1127377 FGK96_RS10050 WP_138083402.1 2083313..2084026(+) (treR) [Streptococcus porcinus strain NCTC10710]
ATGAAGAAGTATGAATATATATTTAAAGATTTAGAATCAAAAATATCCAAAGGAATTTATGCTATTGATGATTTTTTACC
ACCTGAAAACGAATTAAGTAAAAAATATAAGGCTAGCCGAGACACTATTCGCAAGGCCCTCGCTCTCTTAGTTAAAGATG
GCTTGGTTAAGAAGCAACAAGGTCGAGGAACTCAAGTTATCAAACACCATCAAATCCTTTTTCCTATTTCAGAGTTAACA
AGCTACCAAGAATTGGTTACCTATTTTAATATGGACTCTAAAACCAATGTTATTGCTATTGACAAGCTAATTGTGGATAA
TGATATGTCAAAATTGACAGGTTTCCCTCCTCGTTCCATTATTTGGCGAATTACCCGTCAAAGAGTAGTTGATGGTATTG
CCTCTGTCCTAGATGTTGATTACCTCAGCAAGGATATTGTACCAACTATCAGTCGTGAAGTTGCTGAAAAGTCTCTTTAC
CAATACTTAGAGAATGATTTAAACTTAGCTATTGATTTTGCCTTAAAAGAAGTTACCATCGATCAAGTCAATGACAAAGA
TAAAATTTTACTAGATCTAGGATCAGACCGCCACCTTGTTTCTGTTAAATCAAAAGTTTACCTCTCATCTAATGAACAAT
TTCAATTTACTGAGAGCCGCCATAAGTTAGAAAAATTTAAATTTGTTGATTTTGCGAGACGCAAACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(92-227)

Bacterial regulatory proteins, gntR family (GntR)

(4-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4V0A0L2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

65.812

98.734

0.65

Multiple sequence alignment