Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | FGL04_RS00660 | Genome accession | NZ_LR594035 |
| Coordinates | 103508..104464 (+) | Length | 318 a.a. |
| NCBI ID | WP_138067850.1 | Uniprot ID | A0A4U9XLG1 |
| Organism | Streptococcus pseudoporcinus strain NCTC5385 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 98508..109464
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL04_RS00630 (NCTC5385_00128) | - | 101434..101805 (+) | 372 | WP_225247737.1 | DUF1033 family protein | - |
| FGL04_RS00635 (NCTC5385_00129) | comYC | 101744..102010 (+) | 267 | WP_138067846.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FGL04_RS00640 (NCTC5385_00130) | comGD | 101970..102398 (+) | 429 | WP_037598912.1 | competence type IV pilus minor pilin ComGD | - |
| FGL04_RS00645 | comGE | 102451..102663 (+) | 213 | WP_229296016.1 | competence system putative prepilin ComGE | - |
| FGL04_RS00650 (NCTC5385_00131) | comGF | 102683..103084 (+) | 402 | WP_171011213.1 | competence type IV pilus minor pilin ComGF | - |
| FGL04_RS00655 (NCTC5385_00132) | comGG | 103062..103463 (+) | 402 | WP_138067849.1 | competence type IV pilus minor pilin ComGG | - |
| FGL04_RS00660 (NCTC5385_00133) | comYH | 103508..104464 (+) | 957 | WP_138067850.1 | class I SAM-dependent methyltransferase | Machinery gene |
| FGL04_RS00665 (NCTC5385_00134) | - | 104520..105713 (+) | 1194 | WP_138067851.1 | acetate kinase | - |
| FGL04_RS00670 (NCTC5385_00135) | - | 106076..106285 (+) | 210 | WP_007895522.1 | helix-turn-helix transcriptional regulator | - |
| FGL04_RS00675 (NCTC5385_00136) | - | 106282..106734 (+) | 453 | WP_138067852.1 | hypothetical protein | - |
| FGL04_RS00680 (NCTC5385_00137) | - | 106746..107393 (+) | 648 | WP_138067853.1 | CPBP family intramembrane glutamic endopeptidase | - |
| FGL04_RS00685 (NCTC5385_00138) | proC | 107571..108341 (-) | 771 | WP_138067854.1 | pyrroline-5-carboxylate reductase | - |
| FGL04_RS00690 (NCTC5385_00139) | pepA | 108360..109427 (-) | 1068 | WP_138067855.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 36017.10 Da Isoelectric Point: 4.8716
>NTDB_id=1127276 FGL04_RS00660 WP_138067850.1 103508..104464(+) (comYH) [Streptococcus pseudoporcinus strain NCTC5385]
MNFEKIEKAYELILENSQLIENELKTHIYDALIEQNAYYLGADGAIEQVLKNNGDLHALNLSKEEWRRAFQFVFIKAGQT
AKLQANHQFTPDSIAFIILFLMEQLHSGDSLDVIEIGSGTGNLAQTLLNNSLKKINYLGLELDDLLIDLSASIAEVMKSS
AIFLQEDAVRPQVLKESDIIISDLPIGYYPNDEIASRYQVASAEGHTYAHHLLMEQSLKYLKKNGFAIFLAPSNLLNSPQ
SDLLKKWLKDYAQLRVVVTLPESIFGNQANAKSIIVLQKNTEKNGETFVYPLTDLQSPQALQRFMEEFKKWKQDNVFS
MNFEKIEKAYELILENSQLIENELKTHIYDALIEQNAYYLGADGAIEQVLKNNGDLHALNLSKEEWRRAFQFVFIKAGQT
AKLQANHQFTPDSIAFIILFLMEQLHSGDSLDVIEIGSGTGNLAQTLLNNSLKKINYLGLELDDLLIDLSASIAEVMKSS
AIFLQEDAVRPQVLKESDIIISDLPIGYYPNDEIASRYQVASAEGHTYAHHLLMEQSLKYLKKNGFAIFLAPSNLLNSPQ
SDLLKKWLKDYAQLRVVVTLPESIFGNQANAKSIIVLQKNTEKNGETFVYPLTDLQSPQALQRFMEEFKKWKQDNVFS
Nucleotide
Download Length: 957 bp
>NTDB_id=1127276 FGL04_RS00660 WP_138067850.1 103508..104464(+) (comYH) [Streptococcus pseudoporcinus strain NCTC5385]
ATGAACTTTGAAAAAATTGAGAAAGCCTACGAGCTTATTTTGGAGAATAGTCAACTCATTGAGAATGAGCTTAAGACGCA
TATTTATGATGCTCTAATTGAGCAGAATGCCTATTATTTAGGAGCTGATGGAGCCATTGAGCAGGTCTTGAAAAACAATG
GCGACTTGCATGCTTTAAACTTAAGTAAGGAAGAGTGGCGTCGCGCCTTTCAGTTTGTTTTTATAAAGGCTGGCCAGACG
GCAAAATTACAAGCTAATCACCAATTTACCCCCGACAGTATTGCTTTTATCATACTTTTTTTGATGGAGCAGTTGCATAG
CGGAGATAGCTTGGACGTGATTGAGATTGGTAGTGGTACAGGAAACCTTGCTCAGACGCTATTAAATAATAGTCTTAAAA
AGATCAACTATCTGGGTTTAGAACTAGATGATTTATTAATTGATTTGTCAGCCAGTATTGCTGAGGTGATGAAATCCTCT
GCAATCTTTCTCCAAGAAGATGCTGTTCGCCCACAAGTGCTAAAAGAAAGTGATATTATTATTAGTGATTTACCTATTGG
TTATTATCCTAATGATGAGATTGCAAGTCGCTATCAGGTGGCAAGTGCTGAAGGTCATACGTATGCCCATCATTTATTGA
TGGAGCAATCATTGAAGTATCTCAAAAAGAATGGCTTTGCGATTTTCCTAGCACCGAGCAATCTTTTAAACAGTCCGCAA
AGTGATTTGTTGAAAAAATGGTTAAAAGACTATGCTCAGCTGAGAGTGGTCGTGACCCTGCCAGAATCTATTTTTGGCAA
TCAAGCAAATGCAAAATCCATTATTGTCCTACAAAAGAACACTGAAAAAAATGGTGAAACCTTTGTTTACCCACTGACAG
ATTTACAATCACCACAGGCTCTTCAAAGGTTTATGGAAGAGTTTAAAAAATGGAAACAAGATAATGTTTTTTCATAA
ATGAACTTTGAAAAAATTGAGAAAGCCTACGAGCTTATTTTGGAGAATAGTCAACTCATTGAGAATGAGCTTAAGACGCA
TATTTATGATGCTCTAATTGAGCAGAATGCCTATTATTTAGGAGCTGATGGAGCCATTGAGCAGGTCTTGAAAAACAATG
GCGACTTGCATGCTTTAAACTTAAGTAAGGAAGAGTGGCGTCGCGCCTTTCAGTTTGTTTTTATAAAGGCTGGCCAGACG
GCAAAATTACAAGCTAATCACCAATTTACCCCCGACAGTATTGCTTTTATCATACTTTTTTTGATGGAGCAGTTGCATAG
CGGAGATAGCTTGGACGTGATTGAGATTGGTAGTGGTACAGGAAACCTTGCTCAGACGCTATTAAATAATAGTCTTAAAA
AGATCAACTATCTGGGTTTAGAACTAGATGATTTATTAATTGATTTGTCAGCCAGTATTGCTGAGGTGATGAAATCCTCT
GCAATCTTTCTCCAAGAAGATGCTGTTCGCCCACAAGTGCTAAAAGAAAGTGATATTATTATTAGTGATTTACCTATTGG
TTATTATCCTAATGATGAGATTGCAAGTCGCTATCAGGTGGCAAGTGCTGAAGGTCATACGTATGCCCATCATTTATTGA
TGGAGCAATCATTGAAGTATCTCAAAAAGAATGGCTTTGCGATTTTCCTAGCACCGAGCAATCTTTTAAACAGTCCGCAA
AGTGATTTGTTGAAAAAATGGTTAAAAGACTATGCTCAGCTGAGAGTGGTCGTGACCCTGCCAGAATCTATTTTTGGCAA
TCAAGCAAATGCAAAATCCATTATTGTCCTACAAAAGAACACTGAAAAAAATGGTGAAACCTTTGTTTACCCACTGACAG
ATTTACAATCACCACAGGCTCTTCAAAGGTTTATGGAAGAGTTTAAAAAATGGAAACAAGATAATGTTTTTTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
67.508 |
99.686 |
0.673 |
| comYH | Streptococcus mutans UA140 |
67.192 |
99.686 |
0.67 |