Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FGL00_RS10530 Genome accession   NZ_LR594034
Coordinates   2121204..2121917 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2116204..2126917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL00_RS10520 (NCTC8546_02168) treC 2117274..2118902 (-) 1629 WP_138098770.1 alpha,alpha-phosphotrehalase -
  FGL00_RS10525 (NCTC8546_02169) treP 2118969..2120993 (-) 2025 WP_003059974.1 PTS system trehalose-specific EIIBC component -
  FGL00_RS10530 (NCTC8546_02170) treR 2121204..2121917 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  FGL00_RS10540 (NCTC8546_02171) - 2122199..2122537 (-) 339 WP_138084076.1 helix-turn-helix domain-containing protein -
  FGL00_RS10545 (NCTC8546_02172) - 2122723..2123580 (+) 858 WP_003058766.1 VOC family protein -
  FGL00_RS10550 (NCTC8546_02173) yaaA 2123622..2124353 (+) 732 WP_138084078.1 peroxide stress protein YaaA -
  FGL00_RS10555 (NCTC8546_02174) nrdG 2124526..2125140 (-) 615 WP_003058750.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  FGL00_RS10560 (NCTC8546_02175) - 2125144..2125647 (-) 504 WP_003058815.1 GNAT family N-acetyltransferase -
  FGL00_RS10565 (NCTC8546_02176) - 2125656..2126591 (-) 936 WP_138098772.1 Gfo/Idh/MocA family oxidoreductase -
  FGL00_RS11070 (NCTC8546_02177) - 2126620..2126766 (-) 147 WP_003053094.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=1127266 FGL00_RS10530 WP_002982243.1 2121204..2121917(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1127266 FGL00_RS10530 WP_002982243.1 2121204..2121917(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTTAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment